Gene Daci_5730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5730 
Symbol 
ID5751350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6377872 
End bp6378825 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content68% 
IMG OID641300862 
Producthypothetical protein 
Protein accessionYP_001566743 
Protein GI160901161 
COG category[S] Function unknown 
COG ID[COG3817] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.290991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.578423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA CCATCCAACA CCTGTACTAC CTGGTCGGCT TCGTCCTGGC CGTCACGGCC 
GTGATGACGC TGCGCGATGC CAGCAACCCC AAGCGCTGGT CCAGCGGCCT GTTCTGGGCG
CTGTATGCAG CCGTCTTCCT GGTGGGCAAT GAACTGTCGC CCGTGATCGT GGGCGTGATC
GCCGTGGCCA TGGCCCTGAT CGCCGGCTTC GGCGGCGTAG GCAGTGGCCG CCATGCGCCG
CGCAGCGATG CCGAATACCT GGCCAGCGCC AAGCGCCTGG GCAACAAGCT GTTCGTGCCG
GCCCTGGCGA TCCCGCTGAT CACCATGATC GGCACGCTCA GCGCCTCGCA CCTGGTCTTC
GGCGGCACGC CCCTGCTGGA CCCCAAGGCC ACCACGCTGG TGAGCCTGGG CGTGGGCTGC
GTGCTGGCGC TGGGCCTGGC CTGCTGGCTG ACCCGCGAGA CGCCCGCCCA GGGCATGCGC
GAATCGCGCC GCCTGACCGA TGCGCTGGGC TGGGCCCTGG TCCTGCCCCA GATGCTGGGC
ATGCTGGGCC TGGTGTTCTC GGACGCCGGC GTGGGCAAGG CCGTGGCCTA TGTGACCACC
ACCTATATCA ACATGGACAT CCGCTTCGTG GCCGTGGCCG TCTACGTGCT GGGCATGGCG
CTGTTCACGG TGGTGATGGG CAATGGCTTC GCGGCCTTCC CGGTGATGAC GGGCGGCGTG
GGCGTGCCTA TCCTGGTCGG CGTCTACCAT GGCGACCCGG CCGTGATGGC GGCCATCGGC
ATGCTCTCGG GCTACTGCGG CACCCTGCTG ACGCCCATGG CGGCCAACTT CAACCTGGTG
CCCGCCGCGC TGCTGGAGAT CGACAAGAAT GCCGTGATCC GAGCCCAGGT GCCCACGGCC
CTGGCCCTGC TGACCGCCAA TGTCTTCCTG CTGTACTTCC TGATGTTCCG TTAA
 
Protein sequence
MTLTIQHLYY LVGFVLAVTA VMTLRDASNP KRWSSGLFWA LYAAVFLVGN ELSPVIVGVI 
AVAMALIAGF GGVGSGRHAP RSDAEYLASA KRLGNKLFVP ALAIPLITMI GTLSASHLVF
GGTPLLDPKA TTLVSLGVGC VLALGLACWL TRETPAQGMR ESRRLTDALG WALVLPQMLG
MLGLVFSDAG VGKAVAYVTT TYINMDIRFV AVAVYVLGMA LFTVVMGNGF AAFPVMTGGV
GVPILVGVYH GDPAVMAAIG MLSGYCGTLL TPMAANFNLV PAALLEIDKN AVIRAQVPTA
LALLTANVFL LYFLMFR