Gene Daci_5713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5713 
Symbol 
ID5751333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6352055 
End bp6353140 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content71% 
IMG OID641300845 
Producthypothetical protein 
Protein accessionYP_001566726 
Protein GI160901144 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0304105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CATCCCTCCC ACGCCCCTCC CATCCGTCCG GCTGGCTGCG CCAGTTGACC 
GAGCTTGCGC CCGGCCTGCT GCTGGCCGGC GCCATTGCCG CAGCCGCCAC CTGGGGCGCA
CGCCAGCCCC TGCTGGCCGG CTCGGGCCTG AGTGCGCTGA CGCTGGCCAT CTGCATCGGC
CTGGTCATCG GCAACACCGT CTATCCGCGC CTGGCGCCCA GCTGCCATGC CGGCGTAGGC
CTGGCCAAGC AGCGCCTGCT GCGCGCGGGC ATCGTGCTCT ACGGCCTGCG GCTGACCTTC
CAGGACATAG GCCATGTGGG CATGGCCGGC GTGGTGGTCG ATGCCCTGGT GCTGGGCAGC
ACCTTCTTGC TGGCGCAATG GCTGGGCCGC CGCGTCTTCG GGCTGGATGC GCGCACCACG
GTGCTGATCG GCGCGGGCAG CTCCATCTGC GGCGCCGCTG CCGTGCTGGC CACCGAACCC
GTGATCAAGG GCCGCGCCGA AGACGTGGCC GTGGCCGTGG CCACCGTGGT GGTCTTCGGC
ACCGTGGGCA CCTTCCTCTA CCCCGCGCTG TTCCACTGGA ACGCTTCCCA CGGCTGGCTG
GACATGTCGC CTGCGCAGTA CGGCCTGTAC GTGGGCTCCA CCGTGCACGA GGTGGCCCAG
GTCGTGGCCG CCGGCGAAGC CATTGCCCCC GAAGCCGCCG ACGTGGCCGT GATCTCCAAG
ATGGTGCGCG TGATGATGCT GGCCCCCTTC CTGCTGCTGC TGTCCATGGC GGTGGCGCGC
GGCAACCGCA GCAGCCAGGT GAGCGACGGC CAGCCGCGCC GCATCACCAT TCCGTGGTTT
GCGCTGGGCT TCGTCGCCAT GGCCGGCGTG AACTCCCTGG GCGTGCTGCC CGCTGCCGTG
GTGCAGGTGG GCGTGCAGCT GGACAACGCC CTGCTGGCCG TGGCCATGGC GGCCCTGGGC
CTGACCACCC ATGTCCGCGC CGTGCGTGCC GCAGGCACGA AGCCCCTGCT GCTGGCCGCC
TTGCTGTTCG CATGGCTTCT GGTGGCGGGC CTGCTCTTCA ACCGCTGGGT GCCCGGCCTG
CTCTGA
 
Protein sequence
MNTTSLPRPS HPSGWLRQLT ELAPGLLLAG AIAAAATWGA RQPLLAGSGL SALTLAICIG 
LVIGNTVYPR LAPSCHAGVG LAKQRLLRAG IVLYGLRLTF QDIGHVGMAG VVVDALVLGS
TFLLAQWLGR RVFGLDARTT VLIGAGSSIC GAAAVLATEP VIKGRAEDVA VAVATVVVFG
TVGTFLYPAL FHWNASHGWL DMSPAQYGLY VGSTVHEVAQ VVAAGEAIAP EAADVAVISK
MVRVMMLAPF LLLLSMAVAR GNRSSQVSDG QPRRITIPWF ALGFVAMAGV NSLGVLPAAV
VQVGVQLDNA LLAVAMAALG LTTHVRAVRA AGTKPLLLAA LLFAWLLVAG LLFNRWVPGL
L