Gene Daci_5711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5711 
Symbol 
ID5751331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6350501 
End bp6351010 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID641300843 
ProductCreA family protein 
Protein accessionYP_001566724 
Protein GI160901142 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0147337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC CCAGTGTGAA GTATTTCCCG CGAGGCCGGG CCTTGCTCAC GGCCGCCCTG 
GCCACGCTGC TGCTGGGCGC CTGCGGTGCG CGCGCCGAGC AGGTCGGCGC GGTGGACACG
GTGTTCAAGT TCATAGGCCC GGACCACAAG ATCGTGGTCG ATGCCTATGA CGATCCCAAG
GTGGCGGGCG TGACCTGCTA TGTCTCGCGC GCCAAGACCG GCGGCATCAA GGGCGGCCTG
GGCCTGGCCG AGGACCGCGC CGAAGCCTCG ATCAGTTGCG TGCAGACCGG CCCCATCCAG
ATCCCTGCGC CGCTCAAGCA GCAGGACGAG GTGTTCACCG AACGCATCTC GCTGCTGTTC
AAGCGCCTGC GCGTGGTGCG CATGGTCGAT GCGCAGCGCA ACACCCTGGT CTACATGACC
TACTCGGACC GCGTGATCGA AGGCTCGCCG CAAAACAGCG TCACCGCCGT GCCCGTGCCG
CGCAGCACGC CGATTCCGCT GGGCAAATAA
 
Protein sequence
MIKPSVKYFP RGRALLTAAL ATLLLGACGA RAEQVGAVDT VFKFIGPDHK IVVDAYDDPK 
VAGVTCYVSR AKTGGIKGGL GLAEDRAEAS ISCVQTGPIQ IPAPLKQQDE VFTERISLLF
KRLRVVRMVD AQRNTLVYMT YSDRVIEGSP QNSVTAVPVP RSTPIPLGK