Gene Daci_5702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5702 
Symbol 
ID5751322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6338417 
End bp6339061 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID641300834 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001566715 
Protein GI160901133 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.366134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.106893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACT CGATCAAGCC GCTGCGCTTT TACTTCCACC CCCGCTCGCG CGCGGTCATC 
ACGCGCTGGA TGCTGGAGGA ATGCGGCGCC CGCTATGAGC CCGTGCGGCT GGAATTCGGC
AGCACCATGA AGTCCGCCGA CTACCTGGCC ATCAACCCCA TGGGCAAGGT CCCCGCCCTG
GTGCATGGTA ATACCGCGAT CACCGAACTG GCCGCCATCC TTGCCTATCT GGCCGACATC
TTTCCCGAAC GGCGGCTCGC ACCGGCCGTG GACAGCCCGC TGCGCGGCAG CTACCACCGC
TGGATGTTCT TCCTGGCCGG CCCTGTCGAG GCCGTGATGA CGGCCAAAAG CCAGGGCCAC
CTGGAGCAGC AGACGGCCGA CCAGGCCATG TCTGCCGGCT ATGGCCGCTA TGACGACGTG
GTGCAGACGC TGCGCCAGGC CGTGGCCGGC AGGCGCTACC TGTGCGGCGA CCAGTTCACC
GCGGCCGACG TGCTCATGGC CAGCTACCTG CGCTGGGGCA CGATGATGAA GCTGCTGCCC
GCGCTGCCCG AGTTCAGTGA TTACGGCCAG CCGCTGATGG AACGCCCGGC CTCGCTGCGC
TCCATCCAGC TCAACGAAGC GGACCTCGCG GCCCAGCCGG CATAA
 
Protein sequence
MNDSIKPLRF YFHPRSRAVI TRWMLEECGA RYEPVRLEFG STMKSADYLA INPMGKVPAL 
VHGNTAITEL AAILAYLADI FPERRLAPAV DSPLRGSYHR WMFFLAGPVE AVMTAKSQGH
LEQQTADQAM SAGYGRYDDV VQTLRQAVAG RRYLCGDQFT AADVLMASYL RWGTMMKLLP
ALPEFSDYGQ PLMERPASLR SIQLNEADLA AQPA