| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5661 |
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| Symbol | groEL |
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| ID | 5751281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6295078 |
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| End bp | 6296721 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641300793 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001566674 |
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| Protein GI | 160901092 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00217744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00916783 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGCAA AAGACGTAGT TTTCGGCGGC GAAGCACGCG CCCGCATGGT TGAAGGCGTG
AACATCCTGG CCAACGCGGT CAAGGTCACC CTGGGCCCCA AGGGCCGCAA CGTGGTGCTG
GAGCGCTCCT TCGGCGCCCC CACCGTGACC AAGGACGGTG TCTCGGTCGC CAAGGAAATC
GAACTCAAGG ACAAGCTGCA GAACATGGGC GCCCAGCTCG TGAAGGAAGT GGCCTCCAAG
ACCAACGACA TCGCCGGTGA CGGCACGACC ACCGCCACCG TGCTGGCACA GGCCATCGTC
CGCGAAGGCG CCAAGTACGT GGCCGCCGGC CTGAACCCCA TGGACCTCAA GCGCGGCATC
GACAAGGCTG TCGCCGCCCT GGTGGAAGAG CTGAAGAAGC AATCCAAGGC CACCACCACC
TCCAAGGAAA TCGCCCAGGT CGGCTCGATC TCCGCCAACT CCGACGAATC CGTGGGCAGC
ATCATTGCCG AAGCCATGGA CAAGGTCGGC AAGGAAGGCG TGATCACCGT TGAAGAAGGC
AAGTCGCTGG CCAACGAACT CGACGTCGTC GAGGGCATGC AGTTCGACCG CGGCTACCTG
TCGCCCTACT TCATCAACAA CCCTGAAAAG CAGGTTGCCC TGCTGGACAA CCCCTTCGTG
CTGCTGTTCG ACAAGAAGAT CAGCAACATC CGTGACCTGC TGCCCACGCT GGAAGCCGTG
GCAAAGGCCG GCCGTCCCCT GCTGATCATT GCAGAAGACG TCGAAGGCGA AGCCCTGGCA
ACGCTGGTGG TCAACACCAT CCGCGGCATC CTGAAGGTTG TGGCTGTCAA GGCTCCTGGC
TTCGGCGACC GCCGCAAGGC CATGCTGGAA GACATCGCCA TCCTGACGGG CGGCAAGGTC
ATCGCTGAAG AAGTGGGCCT GGCGCTGGAC AAGGTGACCC TGGAAGACCT GGGCCAGGCA
GTGCGCATCG AAATCGGCAA GGAAAACACC ACCATCATCG ACGGTGCTGG CCAAGCTGCT
GAAATCGAAG CCCGCGTCAA GCAGATCCGC ATCCAGATCG AAGAAGCCAC CAGCGACTAC
GACCGCGAAA AGCTGCAAGA GCGCGTGGCC AAGCTGGCTG GCGGCGTTGC CGTGATCAAG
GTTGGCGCTG CCACCGAAGT CGAAATGAAG GAAAAGAAGG CCCGCGTTGA AGACGCCCTG
CACGCTACCC GCGCTGCTGT GGAAGAAGGC ATCGTGGCCG GCGGTGGCGT GGCTCTGCTG
CGTGCCAAGC AAGCCGTGGG CGACCTGAAG ACCGGCGATG CCGAGCAGGA CGCCGGCATC
AAGCTGATCA TGAAGGCCAT CGAAGCGCCC CTGCGCGAAA TCGTGGCCAA CGCCGGTGGC
GAGCCCTCGG TGGTGGTCAA CGCCGTGCTG AACGGCTCGG GCAACTACGG CTTCAACGCT
GCCAACGACA CCTACGGCGA CATGCTGGAA ATGGGTATCC TGGACCCGAC CAAGGTGACG
CGTACGGCCC TGCAGAACGC CGCTTCCGTG GCATCGCTGC TGCTGACGAC CGAAGCCATG
ATCGCCGAGT CTCCCAAGGC TGAAGGCGGC CCTGCCATGC CCGACATGGG CGGCATGGGT
GGCATGGGCG GCATGGGCAT GTAA
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| Protein sequence | MAAKDVVFGG EARARMVEGV NILANAVKVT LGPKGRNVVL ERSFGAPTVT KDGVSVAKEI
ELKDKLQNMG AQLVKEVASK TNDIAGDGTT TATVLAQAIV REGAKYVAAG LNPMDLKRGI
DKAVAALVEE LKKQSKATTT SKEIAQVGSI SANSDESVGS IIAEAMDKVG KEGVITVEEG
KSLANELDVV EGMQFDRGYL SPYFINNPEK QVALLDNPFV LLFDKKISNI RDLLPTLEAV
AKAGRPLLII AEDVEGEALA TLVVNTIRGI LKVVAVKAPG FGDRRKAMLE DIAILTGGKV
IAEEVGLALD KVTLEDLGQA VRIEIGKENT TIIDGAGQAA EIEARVKQIR IQIEEATSDY
DREKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG IVAGGGVALL
RAKQAVGDLK TGDAEQDAGI KLIMKAIEAP LREIVANAGG EPSVVVNAVL NGSGNYGFNA
ANDTYGDMLE MGILDPTKVT RTALQNAASV ASLLLTTEAM IAESPKAEGG PAMPDMGGMG
GMGGMGM
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