| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5631 |
|---|
| Symbol | |
|---|
| ID | 5751251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6261018 |
|---|
| End bp | 6262814 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641300764 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_001566645 |
|---|
| Protein GI | 160901063 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0685105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACC CCACTGACTC CAGGCCCGTC GATCCGGTCA CGGTCGAGAT CATCCGCAAC
GGCCTGTACG CCGTCACGGA GGAGATGAAG ACCAACCTGA CGCGCACGGC CTACAACCTC
ATCATCTACG AGGCGCTGGA CTTCACGGTC GGCCTGTTCA CGCGCGAGGG TGACACGGTG
TCCATCGGCC TGGGCCTGCC CATGTTCATC CGCGGCATGT CGGAGACGGT CAAGGCCAAG
ATCCGCCACT TCGGCTACGA GAACATCCTG CCGGGTGACA TCCTGGTCAC CAACGATGCC
TACACCACCG GCAGCCACCT GAACCACTTC ACGTTCACCA TGCCGGTGTT CCATGAGGGC
CGGCTCGAAG GCTTCACCTG CTGCATGGCC CACTGGCTGG ACGTGGGCGG CACGCTGGGC
AACGTCACCA CGGACATCTT CAGCGAAGGG ATACAGATCC CCATCATGAA GTACCAGCGC
CAGGGCGAGG TCAACCAGGA CCTGATCGAC ATCATCGCGA TGAACGTGCG CCTGGCCGAG
CGGGCCCTGG GCGATCTGCG CGCGCAGATC ACGGCCATCA CCACGGGCGA GCGCCGCTAT
GTGGAACTGC TGCAGCGCTA TGGCGTGGAT GCGGTCAATG GCGCCATCGC GCAGATCATG
GATTCCAGCG AGGCCGTGGC GCGCAAGAAC ACGCTGTCGA TTCCCGATGG CGTGTACGAG
GCCGAGTCCT TCATGGACGA CGACGGGCTG GACATCGGCA AGCGCATTCC CATCCGCGTC
AAGGTCACGG TGCAGGGCGA CGAGATGACG GTGGACCTGT CGGATGTCTC CAAGCAGGTG
CGCGGCTTCT ACAACTCGGG CTTCACCACG GGCATCGCCT GTGCGCAGGT GGCCTACAAA
TGCCTCACCA CGCCGACCGA CTACCCGGTC AACGACGGCA GCTTTCGGCC GCTCAAGGTG
ATCATGCCCA TGGGCACGGT GATCAGCGCC GAGAGGCCGT ATCCCATGCG CGTGTGGATG
ACCTTCCCCA TGACGGTGAT CGACACCATC TTCAAGGCCC TGGCGCCCGC GATTCCCGAC
CGCTCCATCG CGGGCCACCA TGCGGACCTG GTGTTTCCCA ACATCCATGG CATCTCGCCC
GAGGACGGGC GGCTGTTCAT CGTCGGCATC GGCCCGCTGG GCGGCGGCTG GGGCGCCAAG
AGCCGTGAGG ACGGCGTGTC CGTCACCGTC TGCATCAATG ACGGCGACAC CCACAACAGC
CCCACCGAGC AGCTCGAGGC CAAGTACCCG GTGCTGGTGG AGAAGTACGA GATCCGCCAG
GACTCGGCCG GCGCGGGCCA GTACCGGGGC GGCCTGGGCG CGGAGATGGT GGTGCAGGCG
CTGTCGCCCT TCACCGTCAC CACGCGCATC GACCGCGTGC ACTGCAAGCC CTGGGGCCTG
GAGGGCGGCG GCGACGCCAT GGGCAACGGC CTGGCCGTGC GCCACAAGGG CGAGTGGAAG
ACCGACCATG CCAACGCCAA GATCTTCAAC GTGCGCCTGG AACGCGGCGA TGCCTACCGC
ATGCTGTCGG GCGGCGGTGG GGGCTTTGGC GACCCGCTGG CGCGCGAACT GGACAAGGTG
GCCGAGGACG TGCGCGAAGG CTATGTGAGC GCCCAGGTGG CCCGCGAGGT CTACCGCGTG
GCGCTGGATG GCCAGGGACA GGTGGACCAC GAGGGCACGC AGGCGCTGCG CAGTGCGCCC
AGAGTGCCCG GTGCATCCGG TGCAGCGGCT GCCGCCGTGG CCTGGGACGG GCAGTGA
|
|---|
| Protein sequence | MNHPTDSRPV DPVTVEIIRN GLYAVTEEMK TNLTRTAYNL IIYEALDFTV GLFTREGDTV
SIGLGLPMFI RGMSETVKAK IRHFGYENIL PGDILVTNDA YTTGSHLNHF TFTMPVFHEG
RLEGFTCCMA HWLDVGGTLG NVTTDIFSEG IQIPIMKYQR QGEVNQDLID IIAMNVRLAE
RALGDLRAQI TAITTGERRY VELLQRYGVD AVNGAIAQIM DSSEAVARKN TLSIPDGVYE
AESFMDDDGL DIGKRIPIRV KVTVQGDEMT VDLSDVSKQV RGFYNSGFTT GIACAQVAYK
CLTTPTDYPV NDGSFRPLKV IMPMGTVISA ERPYPMRVWM TFPMTVIDTI FKALAPAIPD
RSIAGHHADL VFPNIHGISP EDGRLFIVGI GPLGGGWGAK SREDGVSVTV CINDGDTHNS
PTEQLEAKYP VLVEKYEIRQ DSAGAGQYRG GLGAEMVVQA LSPFTVTTRI DRVHCKPWGL
EGGGDAMGNG LAVRHKGEWK TDHANAKIFN VRLERGDAYR MLSGGGGGFG DPLARELDKV
AEDVREGYVS AQVAREVYRV ALDGQGQVDH EGTQALRSAP RVPGASGAAA AAVAWDGQ
|
|---|
| |