| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5604 |
|---|
| Symbol | |
|---|
| ID | 5751224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6231987 |
|---|
| End bp | 6233168 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641300737 |
|---|
| Product | S-adenosylmethionine synthetase |
|---|
| Protein accession | YP_001566618 |
|---|
| Protein GI | 160901036 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0192] S-adenosylmethionine synthetase |
|---|
| TIGRFAM ID | [TIGR01034] S-adenosylmethionine synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.617182 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACG ACTTTCTTTT CACCTCGGAA TCCGTCTCTG AAGGCCATCC GGACAAGGTG
GCTGACCAGA TCTCTGACGC GATCCTGGAC GCCATTTTCG CCCAAGACCC GTACAGCCGC
GTGGCGGCCG AGACGCTGAC CAACACGGGC CTGGTGGTTT TGGCAGGTGA GATCACCACC
GGCGCAAACG TCGACTACAT CCAGGTCGCA CGCGACACCA TCAAGCGCAT CGGCTACGAC
AACACCGACT ACGGCATCGA CTACAAAGGC TGCGCCGTGC TCGTGGCCTA CGACAAGCAA
AGCCAGGACA TCGCCCAGGG CGTGGACAAG GCCAGCGATG ACGAGCTCAA CACCGGCGCC
GGCGACCAGG GCCTGATGTT CGGCTACGCC TGCGACGAGA CGCCCGAGCT GATGCCCGCG
CCCATCTACT ACGCGCACCG CCTCGTCGAG CGCCAGGCCC AGCTGCGCAA GGACGGCCGC
CTGCCCTTCC TGCGCCCCGA TGCCAAGAGC CAGGTGACCA TGCGCTACGT GGACGGCAAG
CCCCACAGCA TCGACACCGT GGTGCTGTCC ACCCAGCACA GCCCCGACCA GTCGGAAACC
GCCACCAAGA TGAAGGCCAG CTTCACCGAA GCCATCATCG AGGAAATCAT CAAGCCCGTG
CTGCCCTCCG AGTGGCTGCA GGACACCAAG TACCTGATCA ACCCCACGGG ACGCTTCGTT
GTCGGCGGCC CCCAGGGCGA TTGCGGCCTG ACCGGCCGCA AGATCATCGT CGACACCTAC
GGCGGTGCCT GCCCCCATGG CGGCGGCGCC TTCAGCGGCA AGGACCCGAC CAAGGTGGAC
CGCAGCGCCG CCTACGCCGC GCGCTACGTG GCCAAGAACA TCGTGGCCGC CGGCCTGGCA
CGCCAGTGCC AGATCCAGGT GGCCTACGCC ATCGGCGTGG CACGCCCGAT GAACATCACG
GTCTACACCG AAGGCACGGG CGTCATCCCC GACGCCGAGA TCGCCAAGCT GGTGGCCGCG
CATTTCGACC TGCGCCCCAA GGGCATCATC CAGATGCTGG ACCTGCTGCG CCCCATCTAC
AGCAAGACCG CCGCCTACGG CCACTTTGGC CGTGAAGAGC CCGAATTCAC CTGGGAGCGG
ACGGACAAGG CAGCCGTGCT GCGCGCTGCG GCCGGCCTGT AA
|
|---|
| Protein sequence | MANDFLFTSE SVSEGHPDKV ADQISDAILD AIFAQDPYSR VAAETLTNTG LVVLAGEITT
GANVDYIQVA RDTIKRIGYD NTDYGIDYKG CAVLVAYDKQ SQDIAQGVDK ASDDELNTGA
GDQGLMFGYA CDETPELMPA PIYYAHRLVE RQAQLRKDGR LPFLRPDAKS QVTMRYVDGK
PHSIDTVVLS TQHSPDQSET ATKMKASFTE AIIEEIIKPV LPSEWLQDTK YLINPTGRFV
VGGPQGDCGL TGRKIIVDTY GGACPHGGGA FSGKDPTKVD RSAAYAARYV AKNIVAAGLA
RQCQIQVAYA IGVARPMNIT VYTEGTGVIP DAEIAKLVAA HFDLRPKGII QMLDLLRPIY
SKTAAYGHFG REEPEFTWER TDKAAVLRAA AGL
|
|---|
| |