| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5595 |
|---|
| Symbol | |
|---|
| ID | 5751215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6221684 |
|---|
| End bp | 6222577 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641300728 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001566609 |
|---|
| Protein GI | 160901027 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.475488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.36412 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCCG ATAGGACTCC CGAAAGGGCG GCGTCCGCCA GGCGCCTGCT GCCCCGCGCC
CTGATGGCGC CCGCCGTGGC CGTGCTGCTG TGCTGGATGC TCGTGCCCTT GTTGATGACG
ATTTATTTCT CGCTCGTCAA CTACAACCTC ATGCAGCCAG GCGAGCACCG CTTCGCCGGC
TGGGACAACT ACGCCTTCTT CATCACCGAT CCGGACTTCC TGCCCGCCGT GTGGAACACG
CTGAACTTCC TGGCCAGCGT GGTGCTGATC ACCCTGGTGC TGGGCGTGCT GATCGCTTTG
CTGATCAACG AGCCGTTTCC GGGGCGTGGC GTCGTGCGGG TGCTGCTGAT CTCGCCGTTC
TTCGTGATGC CCACGGTCAA TGCGCTGCTG TGGAAACACA TGATGATGAA CCCGATCTAT
GGCGTGCTGG CCAGCCTGTG GAGGGCCGTC GGACTGCAGC CCGTGGACTG GCTCACCGAG
ATGCCGCTGC TGTCCGTCAT CGTCATGGTG TCCTGGCAAT GGCTGCCCTT CGCCTGCCTG
ATCTTCATCA CCTCGCTGCA GTCGCTGGAC CGCGAGCAGA TGGAGGCGGC GCGCATGGAT
GGGGCCAACG CCCTGCAGCG CTTTTACTAC CTCACGCTGC CCCATCTGGC GCGGCCCATG
GCGGTGGTGG TGATGATCGA GATGATCTTC CTGCTCAGCG TGTTCGCCGA GATCGCCATC
ACCACGGCGG GCGGGCCCGG CAACGAGAGC ACCAACCTGA CCTACCTGAT CTACAAGCAG
TCGCTGATGA ACTTCGACGT GGGCGTGGCC TCGGCCGGTG CACTGTTTGC CGTGGTGCTG
GCCAACATCG TCTCCCTCTT CCTGATCCGC ATCGTCGGCA AGAGCCTGGA CTGA
|
|---|
| Protein sequence | MRADRTPERA ASARRLLPRA LMAPAVAVLL CWMLVPLLMT IYFSLVNYNL MQPGEHRFAG
WDNYAFFITD PDFLPAVWNT LNFLASVVLI TLVLGVLIAL LINEPFPGRG VVRVLLISPF
FVMPTVNALL WKHMMMNPIY GVLASLWRAV GLQPVDWLTE MPLLSVIVMV SWQWLPFACL
IFITSLQSLD REQMEAARMD GANALQRFYY LTLPHLARPM AVVVMIEMIF LLSVFAEIAI
TTAGGPGNES TNLTYLIYKQ SLMNFDVGVA SAGALFAVVL ANIVSLFLIR IVGKSLD
|
|---|
| |