| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5590 |
|---|
| Symbol | |
|---|
| ID | 5751210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6216328 |
|---|
| End bp | 6217260 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641300723 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001566604 |
|---|
| Protein GI | 160901022 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.651891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC CACGCCGCCG CACACCCCGC CAGCGTCACC CTGAACTGGA GCGCGATTTC
GTGCGGACGC CCGCGCTGGG CTATGAGGAT ATGGAGGGCA GTGGCCTGGT GCGCTGCCTG
GCACATGGTT TCCCGAGCCC CCTGGTGCGC TGGCATTTCC ATGAGGAGTA CGAGCTGCAC
CTCATCACCC ACACCTCGGG CCGCGCCTTC GTGGGAGACT GGATAGGACC CTTCGAGCCC
GGCCACCTCG TGCTGTGCGG CCCGCGCCTG CCGCACAACT GGATCTCGTT CGATGCGCCC
GATGGGGGCT CGCCTGCACG CGATTACGTG ATTCTTTTCA ACCACGACCC CATCGCCCGT
GCGGCCGAGC AGATCCCGGA GATGCGCGAG GTGCTTCAAC TGCTGGACCG TGCGCGCCAT
GGCATCGAGT TCTTCGGCTT GGCGCAGACG GCGCGCGCGC ACTGGGATGC GGTCAGGAGT
GCGCGCGGAA TGCGCCGCTT CACGGCCTTT TGCGCGCTGC TGTCCGATCT GGCCGAGTGC
ACCGACTACC GGCTGCTGTC AGCCGTGCAG ATGCAGGGCG CCCAGGGCGA GGCTCAGGTG
GATCAGATCA ACGAGGTGGT CAACCGCATC ATGGCGCGCG TGAGCGAGCC GCTGAGCCTG
GCCGACGTGG CGGCCGAGCT GGGCATGAGC GAGAGCCGCT TCAGCCGCTT TTTCCGCCGG
GCCACGGGCA ACAGCTTCAC CGACTTCGTC AGCCGGGTAC GCATCAACAG CGCATGCCAC
CTGCTCATGC AGACCGACAG CTTCATCGCC GACATCTGCT ACCAGGTGGG CTTCAACAAC
GTGGCCAACT TCAACAGGCG CTTCCTGGAG ATCAAGGGCA TGACGCCCTC GGAGTTCCGC
CGCCAGGCGG ACAGCCGCTT CGGCGCGGGT TGA
|
|---|
| Protein sequence | MTSPRRRTPR QRHPELERDF VRTPALGYED MEGSGLVRCL AHGFPSPLVR WHFHEEYELH
LITHTSGRAF VGDWIGPFEP GHLVLCGPRL PHNWISFDAP DGGSPARDYV ILFNHDPIAR
AAEQIPEMRE VLQLLDRARH GIEFFGLAQT ARAHWDAVRS ARGMRRFTAF CALLSDLAEC
TDYRLLSAVQ MQGAQGEAQV DQINEVVNRI MARVSEPLSL ADVAAELGMS ESRFSRFFRR
ATGNSFTDFV SRVRINSACH LLMQTDSFIA DICYQVGFNN VANFNRRFLE IKGMTPSEFR
RQADSRFGAG
|
|---|
| |