| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5588 |
|---|
| Symbol | |
|---|
| ID | 5751208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6213078 |
|---|
| End bp | 6215261 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641300721 |
|---|
| Product | ResB family protein |
|---|
| Protein accession | YP_001566602 |
|---|
| Protein GI | 160901020 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.946506 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACA ACTCTTCCGG TGCCGCTCTT GCTCCCTCCC GCCCGCAGGC CGCGCGCGCG
ACCCTGGAGC TGCTGGCATC GATGCGCTTC GCGATCTCGC TGCTGACGGT CATCTGCATT
GCCTCGGTGA TCGGCACCGT GCTCAAGCAG CATGAGCCGG TGGGCAACTA CGTCAACCAG
TTCGGGCCTT TCTGGGCCCA GCTGTTCCTC GCGCTCAAGC TCAATGCGGT CTACAGCGCC
TGGTGGTTCC TGCTGATCCT GGCCTTTCTG GTGGTCAGCA CCTCGCTGTG CGTGGCCCGC
CATGCGCCCA AGTACCTGGC CGATCTGCGC AGCTACAAGG AAAACGTTCG CGAACAAAGC
CTCAAGGCCT TCGGCCACCG TGCGCAGAAC GTGGTGCCCG GCAGCGCCGA AGAGGCCGCC
AGGCGCCTGG GCCAGCAGCT GGTGTCGGGC GGCTGGAAGG TGCGGCTGCA GCAGCGCGAC
ACGGCGGCCG GTCCCGGCAC GGGCTGGATG CTGGCGGCCA AGGCGGGCGC GGCCCACAAG
CTGGGCTATA TCGCGGCCCA CAGCGCCATC GTGCTGATCT GCCTGGGCGG GCTGTTCGAT
GGCGACCTCA TCGTGCGCGC GCAGATGTGG CTGGGAGGCA AAACACCTTA TACCGGCGGT
GGCCTGATCT CCGAGGTGTC CGAGCAGCAC CGGCTGAGCG AGCGCAACCC CACCTTCCGA
GGCAACCTGC TGGTGACCGA GGGCGGCACG GCAGGCACGG CCATCCTGTC GCAGTCCGAC
GGCGTGCTGC TGCAGGAGCT GCCCTTTGCG GTGGAACTCA AGAAATTCAT CGTGGAGTAC
TACTCCACGG GCATGCCCAA GCTGTTCGCC AGCGAGGTCG TCATCCACGA CAAGGCCACG
GGCGAGAAGC TGGAAAAGCG CATCGAGGTC AACCACCCGG CCAGCTACCG CGGCATCGAG
ATCTACCAGT CCAGCTTTGA CGACGGCGGC TCGTCGGTGA AGCTGCGCGC CGTGCCGCTG
GAGGCGGGAG CCAAGCCCTT TGATGTCGAG GGCGTGATCG GCGGATCGGA CCAGTTCGTG
CGCAAGCTCC CGGACGGCAA GGACGAGACA GTGACGCTGG AGTTTGCCGA ACTGCGCACC
ATCAACGTGG AGAACTTCGG CGGTGGCGGC GGGGCCAATG GCAGCGGCAC CGATGTGCGC
AAGGTGGACC TGAAGCAGGC CATCGACGAG CGCCTGGGCG CTGCCCACAA GACCGTGACC
AAGAAGGAGC TGCGCAACAT CGGCCCCAGC ATCCGCTACA AGCTGCGCGA TGCCTCGGGC
CAGGCGCGCG AGTTCCAGAA CTACATGCTG CCCGTGGACA CGGGCGACGG CCAGCGCGTG
TTCCTGCTGG GCGTGCGCGA CAGCCAGGCC GATGCCATGC GCTACCTGCG CATTCCCGCC
GATCCCGAAA GCGAGATGGA CACCTTCCTG CGCCTGCGCA GCGCGCTGCA GGACCCCCGG
CTGCGCGAGC AGGCGGCCAA GGCCTATGTG GCCAAGGCCA TCGACGCCTC GCGCTCCGAA
CTCAGTGGCG CGCTGGCGCA GTCGGCCACC AAGGCGCTGG AATTGTTCGC GGGCCAGACC
GACAAGAAGG GGCCGGACGG AAAGCCGCTG GGCGGGCTGC AGGCCATCTC GGACTTCATG
GAAAGCAATG TGCCTGCGGC CGAGCGCGAA CGCGCGGGCG AGGTGCTGGT GCGCATTCTC
AACGGCGTGC TGTTCGAGCT GGCCCAGATC GTGCGCACGC AGGCGGGCCA GGCGCCACTG
GAGCCCAGCG AGCAGACGCA GTCCTTCATG ACCCAGGCCG TGTTCTCGCT CAGCGATGCG
CAGTTCTACC CCATGCCCAT GGTCTTCATG CTGCAGGACT TCAAGCAGGT GCAGGCCAGC
GTCTTCCAGG TGGCGCGCGC CCCGGGCAAG AACGTGGTGT ATCTGGGCTG CCTGTTCCTC
ATCATCGGCG TGTTCTGCAT GCTGTATGTG CGCGACCGCC GCCTCTGGAT CTGGCTTACG
CCCCGCGATG GCCAAAGCCA TGCCGAAATG GCCTTGTCCA CCAATCGCAA GACACTCGAT
GGTGATAGAG AATTCGCCAT GCTGGCCGGC AAGCTGATAG GCGCCGAGCC CATCCACAAG
AAATCCCCCG GAGGTTCCGC ATGA
|
|---|
| Protein sequence | MSDNSSGAAL APSRPQAARA TLELLASMRF AISLLTVICI ASVIGTVLKQ HEPVGNYVNQ
FGPFWAQLFL ALKLNAVYSA WWFLLILAFL VVSTSLCVAR HAPKYLADLR SYKENVREQS
LKAFGHRAQN VVPGSAEEAA RRLGQQLVSG GWKVRLQQRD TAAGPGTGWM LAAKAGAAHK
LGYIAAHSAI VLICLGGLFD GDLIVRAQMW LGGKTPYTGG GLISEVSEQH RLSERNPTFR
GNLLVTEGGT AGTAILSQSD GVLLQELPFA VELKKFIVEY YSTGMPKLFA SEVVIHDKAT
GEKLEKRIEV NHPASYRGIE IYQSSFDDGG SSVKLRAVPL EAGAKPFDVE GVIGGSDQFV
RKLPDGKDET VTLEFAELRT INVENFGGGG GANGSGTDVR KVDLKQAIDE RLGAAHKTVT
KKELRNIGPS IRYKLRDASG QAREFQNYML PVDTGDGQRV FLLGVRDSQA DAMRYLRIPA
DPESEMDTFL RLRSALQDPR LREQAAKAYV AKAIDASRSE LSGALAQSAT KALELFAGQT
DKKGPDGKPL GGLQAISDFM ESNVPAAERE RAGEVLVRIL NGVLFELAQI VRTQAGQAPL
EPSEQTQSFM TQAVFSLSDA QFYPMPMVFM LQDFKQVQAS VFQVARAPGK NVVYLGCLFL
IIGVFCMLYV RDRRLWIWLT PRDGQSHAEM ALSTNRKTLD GDREFAMLAG KLIGAEPIHK
KSPGGSA
|
|---|
| |