| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5574 |
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| Symbol | aroB |
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| ID | 5751194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6197128 |
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| End bp | 6198246 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300707 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001566588 |
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| Protein GI | 160901006 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.751857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCACCG CTTCCTCCTT GCCTGCCGCC CAGGTCGTGA CCATTGACCT GGGTGACCGT
TCCTATCCGA TCACCATCGG CACCGGCCTC CTGGACCAAG CCGCGACCTA TGCCGCCCTG
CCTTCTGCGG CCCAGGCCGT GATCGTCAGC AATGATGTGG TCGCACCGCT CTATGAGCCC
GCACTGCGCC GCGTGCTGGA ACAACGCTAC CGCAGCGTAC GTACCGTGGT GCTGCCCGAT
GGCGAGGCCC ACAAGGACTG GCAGACGCTG AACCTGATTT TTGACGACCT GTTGTCCGGC
GGCTGCGACC GCAAGACCGT GCTGTTTGCG CTGGGCGGCG GCGTCATCGG CGACATGACG
GGCTTTGCCG CCGCCAGCTA TATGCGCGGC GTGCCCTTCG TGCAGGTGCC CACCACGCTG
CTGTCGCAGG TGGACTCGTC GGTGGGCGGC AAGACCGCCA TCAACCATCC GCTGGGCAAG
AACATGATCG GCGCCTTCTA CCAGCCGCAG CTGGTGGTTT GCGACCTGGC TTCGCTGGAC
ACGCTGCCCG TGCGCGAGCT GAGCGCCGGC CTGGCCGAGG TCATCAAGTA CGGGCCGATC
GCCGACATGG ACTTCCTGGC CTGGCTGGAG GAGAACATGG ACGCCTTGCT TGCCCGCGAC
CGCACGGCAC TGGCGCACGC GATCAAGCGC AGCGTGGAGA TCAAGGCCTG GGTCGTGGGC
CAGGACGAGA AAGAGGCTGG GCTGCGCGCC ATTCTCAATT TCGGCCACAC CTTCGGGCAT
GCGATCGAAG CCGGCATGGG CTACGGCAAC TGGCTGCACG GCGAAGGCGT GGGCGCCGGC
ATGGTCATGG CGGCCGAGCT GTCGCAGCGC CTTGGCCTGG TGGATGCTGC CTTCGTGCAG
AGGTTGCGTG TGCTGATCGC GCGTGCGGGC CTGCCCGTGC GTGGCGCCGT CCTGGACGAA
GCCGACAACG CTGGCCGCTA TCTGGAGCTG ATGCGCGTGG ACAAGAAGTC CGAGGCGGGC
GAGATCCGCT TCGTTCTCAT CGACGGGCCG GGAAAGGCCG TCATGCGCTC GGCGCCCGAC
GCGCTGGTGC GCGAGGTCAT CAACGCCTGC TGCGCCTGA
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| Protein sequence | MPTASSLPAA QVVTIDLGDR SYPITIGTGL LDQAATYAAL PSAAQAVIVS NDVVAPLYEP
ALRRVLEQRY RSVRTVVLPD GEAHKDWQTL NLIFDDLLSG GCDRKTVLFA LGGGVIGDMT
GFAAASYMRG VPFVQVPTTL LSQVDSSVGG KTAINHPLGK NMIGAFYQPQ LVVCDLASLD
TLPVRELSAG LAEVIKYGPI ADMDFLAWLE ENMDALLARD RTALAHAIKR SVEIKAWVVG
QDEKEAGLRA ILNFGHTFGH AIEAGMGYGN WLHGEGVGAG MVMAAELSQR LGLVDAAFVQ
RLRVLIARAG LPVRGAVLDE ADNAGRYLEL MRVDKKSEAG EIRFVLIDGP GKAVMRSAPD
ALVREVINAC CA
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