Gene Daci_5573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5573 
Symbol 
ID5751193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6195885 
End bp6197063 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content66% 
IMG OID641300706 
Productdeoxyguanosinetriphosphate triphosphohydrolase-like protein 
Protein accessionYP_001566587 
Protein GI160901005 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0232] dGTP triphosphohydrolase 
TIGRFAM ID[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.940459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAC AGGCCCTGGC CCCCTATGCC TGCAACCCGG CGTTCAGCCG GGGGCGGCGT 
TTCCCGGAGG CGCCTGCGCC CACGCGCAGC GACTTCCAGC GCGACCGGGA CCGCATCGTG
CATTCCTCGG CCTTCCGGCG GCTGGTCTAC AAGACCCAGG TCTTCGTCAA CCATGAAGGC
GACCTGTTCC GCACACGGCT GACGCACTCG CTGGAAGTCG CCCAGCTGGG CCGCTCGGTG
GCCCGGTCGC TGAAACTGGA CGAGGATCTG GTCGAAGCCA TCTGCCTGGC CCACGACCTG
GGCCACACCC CCTTCGGCCA TGCGGGCCAG GATGCGCTCA ATGCCTGCAT GCAGCCGCAC
GGCGGCTTCG AGCACAACCT GCAAAGCCTG CGCGTGGTGG ACCGGCTGGA GGAGCGCTAT
CCGGCCTTTG ACGGGCTCAA CCTGAGCTTC GAGACGCGCG AGGGCATTCT CAAGCACTGC
TCGCGCACCA ATGCCGAGCA CCTGGAAGCG CGGGAGCCCG GTGGCGTGGC CCAGCGCTTT
TTGCTGGGCC GGCAGCCTTC GCTGGAGGCC CAGCTGTGCA ATCTGGCCGA TGCCATTGCC
TACAACGCCC ATGACGTGGA CGATGGCGTG CGCTCCGGCC TGATCACCAT GGCCCAGCTG
CGCGAGGCCG TTCCCTTGTT CGCGCGCTAT CACGATGCAA CGCTGGCCGA GCATCCCCAG
CTGGGCATGC CTTTGGCCGA GCGCCGACTG CTGTACGAAA GCATCCGCCG CATGCTCAGC
GACCAGGTCT ATGACGTGAT CGCCGCCACG CAGCAACGCA TTGCACAGGC ACGGCCCTGT
TCGGTCGATG AGGTGCGCGC ACAGGCTGGC CCCCTGGTGG GCTTCAGCGA TACCATGAGG
CAGCAGTCGC TGCAGCTCAA GCAGTTCCTG CTCCGCAATC TCTATCGCCA TGAACAGGTG
ATGAAGACCA TGGACGGCGC GCAGCAGGTG GTGGCCGAGC TGTTTGCGGC CTACATGGTG
GAGCCCGATC GCATGAAGCC GCGCTTTGTG CAACGGGCCA TGCTGGCCGA GGACGTATCG
GCGCGTGCGC GGGTGGTGGC CGACTTCATC GCCGGGATGA CGGATCGCTA CGCGGCCCGG
GAACATGAGC TGCTGACAGG CCTGCGCCTG CTGGGCTGA
 
Protein sequence
MQKQALAPYA CNPAFSRGRR FPEAPAPTRS DFQRDRDRIV HSSAFRRLVY KTQVFVNHEG 
DLFRTRLTHS LEVAQLGRSV ARSLKLDEDL VEAICLAHDL GHTPFGHAGQ DALNACMQPH
GGFEHNLQSL RVVDRLEERY PAFDGLNLSF ETREGILKHC SRTNAEHLEA REPGGVAQRF
LLGRQPSLEA QLCNLADAIA YNAHDVDDGV RSGLITMAQL REAVPLFARY HDATLAEHPQ
LGMPLAERRL LYESIRRMLS DQVYDVIAAT QQRIAQARPC SVDEVRAQAG PLVGFSDTMR
QQSLQLKQFL LRNLYRHEQV MKTMDGAQQV VAELFAAYMV EPDRMKPRFV QRAMLAEDVS
ARARVVADFI AGMTDRYAAR EHELLTGLRL LG