| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5546 |
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| Symbol | |
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| ID | 5751166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6164257 |
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| End bp | 6167085 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300679 |
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| Product | putative signal peptide protein |
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| Protein accession | YP_001566560 |
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| Protein GI | 160900978 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3868] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCTT TCCTGCGAAC CTGCCTGTTT TGCTGGGGGG TGCTGTGCGG CTGGGCGGTG
CAGGCCGCCG AGCCGGCGGT TGCCGTCTAT TACGGAAACA AGGCCTCGCT CAGTGAACTG
AGCCTCTACG ACATCGCCGT CGTGGAGCCG GGCCACGGCT ACGACCCCGT TCAATTCCGC
AAGCAGGCTC CGGGCAGCGA ACTCTACGCA TATGCCTCCG TGGCCGAGGT GCTGCCCGAG
CGCGCCTACT TCAGCAAGAT TCCCGAGGCC TGGAAGATGG CGCGCAACGG CGCCTGGCAG
TCCATCGTCC TGGACCAGAC GCCTGCCCAG TGGCCTGCCT TCTTCGCCGA CGAGGTGATC
GCACCGCTGT GGAAGCAGGG CTTTCGCGGC TTCTTCCTGG ACACGCTGGA CTCCTACCGC
CTGGCCGCGA ATTTCGACGA AAAGGCCCAG CAGGACGGCC TGGTGCGCGT CATCGAGACG
CTGCACCAGC GCTATCCCGG CATCCGCCTG ATCCTGAACC GGGGCTTCGA GATCGTGCCG
CGCGTGCGCG ACAAGGTGCA GATGGTGGCG GCGGAGTCGC TGTTGCGGGG CTGGGATGCC
AGCCTCAAGC GCTATGTGAA CGTGCCCGAG AAAGACCGCG AATGGCTGCT GCAGCAACTG
CAGACCATCC GCGAGCGTGA CCGCCTGCCG GTGCTGTCCA TCGACTACGT GGCCCCGCAC
GACCGCGATG CCACGCGCGA GACCGCCCGC CGCATTGCGC AGCTGGGCGT CATCCCCTGG
GTGTCGGATG CAGGCCTGCA GACCCTGGGC ATAGGCCAGG TGGAGGCGGT GGCGCGCAGG
GTGTTGATTC TCTACAACGG TGCAGACTAT CCGTCCATCA ACGGCGCATC GGCGCACCGC
TTTCTGGAAA TGCCCATCAA CTACATGGGC TACGTTGCCG ACTACGCCGA TGTGCGCGAG
CCCCTGCCTG AAGGCGTGGC GCGTGACCGC TATGCCGGCG TGGTGAGCTG GTTCGGCGGC
GCGGTGCCCG AGATGCGGGC CAAAAGCGTG CGGCAGTGGC TGGCCAACCA GGTGCAGCAG
GGCATGCCGC TGCTGGTGCT CAACACGCTG GGCCTGTCAC AGGACCGCAC CATGTCGGCC
GCCCTGGGCA CGCGCAGCAC GGAAGCGGCA CCCGTGTTCC CGCTGCGGCG CGCCGAGCAG
GCGCCACTCA TGGGGTTCGA GATACCGCCG GCCGAGCCCG CGCACGACTA CGAAGGCTGG
GAGTTCACGC CGCAGATGGC CAAGGGCAGC CGCGAGCTGC TGTCCTTCGA CGACAAGCGG
GGGCGCCGCT TCGTCTCTGC CGCCATCACG CCCTGGGGCG GCTTTGCGCT CATGCCCTAT
GTGGTGGTGA GCATGCCGGG CACCGACCAG TCGCGCTGGG TGATCGATCC CTTCGCGCTG
CTGCGCGAGG CGCTGCGCCT GAAGGATTTC CCCGCGCCCG ATGTCTCCAC GGAGAACGGC
CGCCGCCTGT TGGTGGCCCA TGTGGATGGC GACGGCTTTC CCTCCAGGGC CGAGCTGCCT
GGCACGCCGT TCGCCGGTGA AGTGCTGCGC CGCGAGATCC TGGAGCGCTA CAAGATCCCG
CACACCATCT CGGTCATCGA GGCCGAGGTC TCCCCGCAGG GCCTGTATCC GCAGTGGGCC
GAGCAGCTGG AGGGCATTGC CAAGCGCATC TTCGCCATGC CCCATGTCGA GATCGCCAGC
CATTCCTACT CGCACCCCTT CTTCTGGGAG CCCGGGGCGG CGCCCAACGA GGACGACAGC
AAGGAGGTGA ATCTCAACCT CCACATCCCC GGCTACCAGA TGGACATGAA CCGGGAGATC
AACGGCTCGG TCGACTACAT CCGCAAGCGC CTGGCACCGC CCGGCAAGCC GGTGGACGTG
TTCCTGTGGA CCGGCAACAC GGCGCCCAGC GCCGAGGCCC TGGCCATCTC CGATGCCGCC
GGCCTGCTCA ACATGAATGG TGGCGACACG GCCATCACGC GCAGCAATCC CTCGCTGACC
GAGGTGCGCA GCTGGGGTCT GCGCAAGGGC GGCCACCTGC AGATCTATGC GCCCGTCACC
AACGAGAACA TCTACACCAA CCTCTGGCAC GGGCCGTTCT ACGGCTTCGA GCGCGTCATC
GAGACCTTCG AGATGACCGA GGCTCCCCGG CGCCTGAAGG CCGTGGACAT CTACTACCAC
TCCTACTCCG CCAGCAAACA GGCCAGCATC AAGGCGCTGC ACAGGATCTA CCAGTGGGCG
CTGGCGCAGC GGCTGAACCC GGTCTACAGC TCCGAGTACA TCCGCAAGGT GCAAGATTTC
TACGAATTCG CCATCGGCCG CGACGCGCAG GGCTGGCGCC TGCGGGGTCC GGGCCAGCTG
CGCACGCTGC GCATGCCGCC CGGCATGGCC CTGCCTTCCA TGGCTGCCAG CAGCGGCATT
GCCGGCTATG CCAAGGGGGC AGACGGCAGC TACCTGCACC TGGCCGGCAG CGCCGGATAC
CTGGTGCAAC AGACGCAACA GGACGCCGCA GGCGCGGCCG CCCACGCGGC GCGCCCCTAT
CTGGTGGATG CCAATGCCCG GCTCACGCAA TGGCAGCCCC AGGCCGACGG CGGCGTGCGC
TTCGCCCTGC AGGGCCATGT GCCGCTGGAG CTGCGCATGT ACCTGCCTGC CGGCTGTTCG
CTGAGTTCCG CGAACGCCGC CACGCCCCTC CTGGCCGTGG CGGGGGCCGA TACCGGCAAC
GCCAACCTCC GTTCCTTCAG AAGTACCCAA AACAGTGTCG AACTCCAAGC GCAATGCCGG
GGGCTCTGA
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| Protein sequence | MNAFLRTCLF CWGVLCGWAV QAAEPAVAVY YGNKASLSEL SLYDIAVVEP GHGYDPVQFR
KQAPGSELYA YASVAEVLPE RAYFSKIPEA WKMARNGAWQ SIVLDQTPAQ WPAFFADEVI
APLWKQGFRG FFLDTLDSYR LAANFDEKAQ QDGLVRVIET LHQRYPGIRL ILNRGFEIVP
RVRDKVQMVA AESLLRGWDA SLKRYVNVPE KDREWLLQQL QTIRERDRLP VLSIDYVAPH
DRDATRETAR RIAQLGVIPW VSDAGLQTLG IGQVEAVARR VLILYNGADY PSINGASAHR
FLEMPINYMG YVADYADVRE PLPEGVARDR YAGVVSWFGG AVPEMRAKSV RQWLANQVQQ
GMPLLVLNTL GLSQDRTMSA ALGTRSTEAA PVFPLRRAEQ APLMGFEIPP AEPAHDYEGW
EFTPQMAKGS RELLSFDDKR GRRFVSAAIT PWGGFALMPY VVVSMPGTDQ SRWVIDPFAL
LREALRLKDF PAPDVSTENG RRLLVAHVDG DGFPSRAELP GTPFAGEVLR REILERYKIP
HTISVIEAEV SPQGLYPQWA EQLEGIAKRI FAMPHVEIAS HSYSHPFFWE PGAAPNEDDS
KEVNLNLHIP GYQMDMNREI NGSVDYIRKR LAPPGKPVDV FLWTGNTAPS AEALAISDAA
GLLNMNGGDT AITRSNPSLT EVRSWGLRKG GHLQIYAPVT NENIYTNLWH GPFYGFERVI
ETFEMTEAPR RLKAVDIYYH SYSASKQASI KALHRIYQWA LAQRLNPVYS SEYIRKVQDF
YEFAIGRDAQ GWRLRGPGQL RTLRMPPGMA LPSMAASSGI AGYAKGADGS YLHLAGSAGY
LVQQTQQDAA GAAAHAARPY LVDANARLTQ WQPQADGGVR FALQGHVPLE LRMYLPAGCS
LSSANAATPL LAVAGADTGN ANLRSFRSTQ NSVELQAQCR GL
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