Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5505 |
Symbol | |
ID | 5751125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6109330 |
End bp | 6110391 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641300638 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_001566519 |
Protein GI | 160900937 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.32851 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGATT CCACACACCC CCAAGCCGCG ATTGCCATCA CCCAGGGCGA CTCTGCAGGC GTAGGGCCTG AGACCATCGC CAAGGCATTC ATGGAAGTGC CCGAGGTCAT GCGCGACTGC TTCGTCGTCG GCGAGTTGCA GACGCTGCGC CGGGCAGCCG CCGTGGCGGC GCGTGCGCGC GATGGCGACA ACGCCATTCC CATGCCCGTA GCCGTCATCG AGTCGGCTGA GCAACTGTGG CAGGTGCCGC CCCATTGCAT CCCTTTGCTG GAGCTGCCCG GGCTGCCCGG TCCTGCGCCC TGGGGCCAGG TGAGTGCCAG CGCCGGTGAT GCGGCTGCGC GCTGCGTGGT CTGGGCCGCG CGGGCTGCCT TGCGAGGCGA AATCGCGGCT CTGGTGACGG CGCCCCTGCA CAAGGAGGCG CTGCATGCTG CGGGCGTGGA CTTTCCTGGT CATACCGAGC TGCTGCAGTT CGAGGCTGCG CAGCATGCGG GTGTGGGCCT GGACCGCATG CCGGTACGCA TGATGCTGGC CAACGATGAG CTGCGGACGG TGCTGGTCAG CATCCATACC TCGCTGCGCA AGGCGATCGA TGCGGTAACG AAGGACAACC TGCTGCAGAC CTTGCGCATC ACGCATGAAG CCCTGTCTCG CAGCCTGGGC CGCCCGCCGC GGATCGGTGT GGCAGGGCTG AACCCGCATG CGGGCGAGGG CGGCCTGTTC GGCAGCGAGG AGGTCGAGAT CATTGCCCCG GCCATCACCC AGGCGCGCGC CGAGGGCCTG GACGCCCATG GACCTTTTGC GCCCGATACG GTGTTCATGC GCGCCCGCAA TGCTCCCGGC CACCCCGGTG AGTTCGACGT GGTGCTGGCC ATGTACCACG ACCAGGGACT GATTCCCGTG AAGTACCTGG GCGTGGAAAA GGGCGTGAAT GTCACATTGG GGCTGCCGCT GGTGCGCACC AGCCCGGACC ACGGCACGGC TTTCGATATT GCAGGGCAGG GCCTTGCAGA GGCGAGCAGC CTGATTGAGT CCGTGCGAAT GGCGCGCAAA TTGGCGGCTT GA
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Protein sequence | MPDSTHPQAA IAITQGDSAG VGPETIAKAF MEVPEVMRDC FVVGELQTLR RAAAVAARAR DGDNAIPMPV AVIESAEQLW QVPPHCIPLL ELPGLPGPAP WGQVSASAGD AAARCVVWAA RAALRGEIAA LVTAPLHKEA LHAAGVDFPG HTELLQFEAA QHAGVGLDRM PVRMMLANDE LRTVLVSIHT SLRKAIDAVT KDNLLQTLRI THEALSRSLG RPPRIGVAGL NPHAGEGGLF GSEEVEIIAP AITQARAEGL DAHGPFAPDT VFMRARNAPG HPGEFDVVLA MYHDQGLIPV KYLGVEKGVN VTLGLPLVRT SPDHGTAFDI AGQGLAEASS LIESVRMARK LAA
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