| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5497 |
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| Symbol | |
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| ID | 5751116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6100903 |
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| End bp | 6103650 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641300629 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001566511 |
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| Protein GI | 160900929 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.441973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.259871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA ACTTCCTCAC CAAACTATTC GGCAGCCGAA ACGATCGGCT TCTCAAGCAA
TACCGCAAGA CGGTTGTTCG CATCAATGCG ATGGAGCCCG ACTACGAGAA GCTCAGCGAC
GAGGCTCTGC GTGCAAAGAC GCAGGAGTTC AAGGAACGTG TGGCCAAGGG CGAGTCGCTG
GACGACCTGC TGCCCGAAGC CTTCGCCGTG GTGCGCGAGG GCTCCAAGCG CGTCATGAAG
ATGCGCCACT TCGACGTTCA GCTGCTGGGC GGCATGGCGC TGCACTACGG CAAGATCGCC
GAAATGCGCA CCGGCGAAGG CAAGACGCTG ACCGCCACGC TGCCGGTCTA CCTGAACGCA
CTGTCGGGCA ATGGCGTGCA CGTGGTGACC GTGAACGACT ATCTGGCCAA TCGCGATGCG
ACCTGGATGG CCAAGCTGTA CAACTTCCTC GGACTGTCGG TGGGCATCAA CCTGCCCAAC
ATGCCGCGCG AGGAAAAGCA GGCCGCCTAC AACAGCGACA TCACCTACGG CACGAACAAC
GAATACGGCT TCGACTACTT GCGCGACAAC ATGGTCTACG AGTCGGGCGA CCGCGTTCAG
CGCGTGCTCA ACTACGCCAT CGTTGACGAG GTGGACTCCA TCCTGATCGA TGAGGCCCGC
ACGCCGCTGA TCATCAGCGG CCAGGCCGAA GACCACACGG CCATGTACGT GGCCATGAAC
AAGATCGTTC CCAACCTGGT GCGCCAGGAA GGCGAGGCCG ACCCGCGCAC CGGCGAAGGC
GTGACCAAGC CCGGCGACTT CACCGTGGAC GAGAAGAGCC ACCAGGTGTT CCTGACCGAC
CAGGGTTACG AGGCCGCAGA GCGCCTGCTG GGCCACGCCG GCATGATTGC CGAGGGCGCC
TCGCTGTACG ACCCGGCCAA CATCACCCTG GTCCACCATC TCTACGCGGC GCTGCGTGCC
AACAACCTCT ACCACCGTGA CCAGCACTAT GTGGTGCAGA ACGGCGAGAT CGTCATCGTT
GACGAGTTCA CGGGCCGCCT GATGGCAGGC CGGCGCTGGA GCGACGGCCT GCACCAGGCG
GTCGAGGCCA AGGAAGGCGT GACCATCCAG GCCGAGAACC AGACCATGGC CTCGATCACC
TTCCAGAACT ACTTCCGTCT CTACGGCAAG CTGGCTGGCA TGACGGGCAC GGCCGATACT
GAGGCCTACG AATTCCAGGA AATCTATGGT CTCGAGACCA TGGTGATTCC GCCCAACCGT
CCCAGCAAGC GCGACGACCA GCTCGACCGT GTCTACAAGA CCACGCGCGA GAAGTACGAG
GCGGCGATCC GCGATATCCG TGAATGCTAT GAGCGCGGCC AGCCCGTGCT GGTGGGCACG
ACTTCGATTG AGAACTCCGA AATCATCGAC GAGCTGCTCA ACAAGGAAAA CCTGCCCCAC
CAGGTGCTCA ACGCCAAGCA GCACGAGCGC GAGGCCGACA TCGTGGCCCA GGCCGGTCGT
CCCGGCATGA TCACCATCGC CACCAACATG GCCGGCCGCG GCACCGACAT CGTGCTGGGC
GGCAACATCG AAAAGCAGGT GGCTGCTGTC GAGGCCGATG AATCCCTGTC CGAAGCCGAA
CGTCAGCAGC GCATCGAACA AATGCGCGCC GACTGGAAGA TCGAGCACGA CAAGGTCTCG
GCCCTGGGTG GCCTGCGCAT CATCGCCACG GAGCGCCATG AATCGCGCCG TATCGACAAC
CAGCTGCGTG GCCGTTCGGG CCGCCAGGGC GATCCCGGCT CCTCGCGCTT TTACCTGAGC
CTGGACGATG CGCTGATGCG CATCTTCGCT GGCGACCGTG TGCGCGCCAT CATGGACCGC
CTGAAGATGC CCGATGGCGA AGCCATCGAA GCCGGCATCG TGACCCGCTC CATCGAAGGC
GCTCAGCGCA AGGTCGAGGC CCGCAACTTC GACATCCGCA AGCAGCTGCT CGAATACGAC
GACGTGTCCA ACGACCAGCG CAAGGTGATC TACCAGCAGC GCAACGAGAT CCTCGACGCC
TCGGACCTGT ACGAGATGAT CACGGTGATG CGCGACGACG TGGTGTCCGA TCTGGTGCGC
CAGTACGTTC CTGCCGAGTC CATGGAAGAG CAGTGGGACC TGGCCGGTCT GGAAAAGGCG
CTGGAAAGCG AATGGCGCAT CCAGCTGCCG CTGCAGTCGC AGGTGCAGTC CGCGCATGCC
ATCACCGACG AGGAAATCCT CGAAAAGGTA CTGCAGGCCG CCCGCGAAGT GTTCGATGCC
AAGGTCGAGC TGATCGGCCG CGAGAACTTC ACGCAATTCC AGCGCGCCGT TCTGCTGCAA
AGCTTCGACA CCAACTGGCG TGACCACCTG TCTGCACTCG ACTATCTGCG CCAGGGCATC
CACCTGCGCG GCTATGCGCA AAAGCAGCCC AAGCAGGAAT ACAAGCGCGA GGCCTTCGAG
CTGTTCCGCC AGCTCATCGA CCAGGTCAAG ACCGAAGTCA CGCGCGTGCT GATGACCGTG
CAGGTGCAGT CGCGCGAACA GGTGGAGCAG GCCACCGAGG CCCTGGAGCA GCGCAGCGCC
CACAGCCTGG AGCACATGAC CTATGGCGCT CCGTCGGATG GCGACATCGG TGGCTCCGTC
GAAGACGAGC CGCTGGAGCT GCCCGAAGGC GCTCGCGTGG GCCGCAATGA TCCCTGCCCC
TGCGGCAGCG GCAAGAAGTA CAAGCAGTGC CACGGCAAGC TGTCGTGA
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| Protein sequence | MATNFLTKLF GSRNDRLLKQ YRKTVVRINA MEPDYEKLSD EALRAKTQEF KERVAKGESL
DDLLPEAFAV VREGSKRVMK MRHFDVQLLG GMALHYGKIA EMRTGEGKTL TATLPVYLNA
LSGNGVHVVT VNDYLANRDA TWMAKLYNFL GLSVGINLPN MPREEKQAAY NSDITYGTNN
EYGFDYLRDN MVYESGDRVQ RVLNYAIVDE VDSILIDEAR TPLIISGQAE DHTAMYVAMN
KIVPNLVRQE GEADPRTGEG VTKPGDFTVD EKSHQVFLTD QGYEAAERLL GHAGMIAEGA
SLYDPANITL VHHLYAALRA NNLYHRDQHY VVQNGEIVIV DEFTGRLMAG RRWSDGLHQA
VEAKEGVTIQ AENQTMASIT FQNYFRLYGK LAGMTGTADT EAYEFQEIYG LETMVIPPNR
PSKRDDQLDR VYKTTREKYE AAIRDIRECY ERGQPVLVGT TSIENSEIID ELLNKENLPH
QVLNAKQHER EADIVAQAGR PGMITIATNM AGRGTDIVLG GNIEKQVAAV EADESLSEAE
RQQRIEQMRA DWKIEHDKVS ALGGLRIIAT ERHESRRIDN QLRGRSGRQG DPGSSRFYLS
LDDALMRIFA GDRVRAIMDR LKMPDGEAIE AGIVTRSIEG AQRKVEARNF DIRKQLLEYD
DVSNDQRKVI YQQRNEILDA SDLYEMITVM RDDVVSDLVR QYVPAESMEE QWDLAGLEKA
LESEWRIQLP LQSQVQSAHA ITDEEILEKV LQAAREVFDA KVELIGRENF TQFQRAVLLQ
SFDTNWRDHL SALDYLRQGI HLRGYAQKQP KQEYKREAFE LFRQLIDQVK TEVTRVLMTV
QVQSREQVEQ ATEALEQRSA HSLEHMTYGA PSDGDIGGSV EDEPLELPEG ARVGRNDPCP
CGSGKKYKQC HGKLS
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