| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5490 |
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| Symbol | |
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| ID | 5751109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6095176 |
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| End bp | 6096060 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641300622 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001566504 |
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| Protein GI | 160900922 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.16559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.184138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTGG AACTCTGGAT GCAGGCTACA TTGGGCGGCC TGCTGGGCCT GTTGGTTGGC
AGCTTTCTCA ACGTGGTGGT GCATAGGCTG CCCCGCATGA TGGAACAGCA ATGGAATGCG
GAATGCGCCC AATGGGCGCA GGAGCAATCC GGTGCCACGC CCCCCTCTGC TGCGCCTGAC
CCTGCCGAGC CTCCCCTGAG CCTGAGCCGC CCCCGCTCGC GCTGCCCGCA TTGCGGCCAT
GCCATCCACT GGTACGAGAA CATTCCCGTG CTCAGCTATC TGGCGCTGCG GGGCCGGTGC
TCGGAATGCA AGGCATCGAT CAGCATCCGC TACCCGCTGG TGGAACTGGC CTGCGCTGCG
CTATTCGCCT ACTGCACGAT GCAATGGGGC ATCACGCCCA CAGGCGCTGC CTGGTGCCTT
TTCAGCGCCG CCTTGCTGAG CCTGGCATTG ATCGACTGGG ATACCACACT GCTCCCAGAC
GACATCACCC TGCCCTTGCT GTGGGCCGGA CTGCTGTCGT CGGCGCTGCA CTGGACCGCC
GTGACTCTGG CCGACGCGGT CTGGGGTGCC GCAGTGGGCT ATCTTTCGCT GTGGCTGGTT
TACTGGGCCT TCAAGCTGGC CACCGGCAAG GAAGGCATGG GCTACGGCGA CTTCAAGCTG
TTTGCCGCGC TGGGCGCCTG GTTCGGCTGG CAGGCACTCG TGCCCATCAT CCTGATCTCG
TCCGTGATTG GCGCCGTCGT GGGCATTGCG CTGAAGATCA ACAGCCGCCT GCGCGAAGGT
GGCTATGTTC CCTTTGGCCC CTTTCTTGCG GGCGCCGGCT TTGCCGCCAT GGTGTTCGGA
CCCCAGCAGA TGCTGCAATC CCTGTTGGCA GCCATCGGTC TTTGA
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| Protein sequence | MVLELWMQAT LGGLLGLLVG SFLNVVVHRL PRMMEQQWNA ECAQWAQEQS GATPPSAAPD
PAEPPLSLSR PRSRCPHCGH AIHWYENIPV LSYLALRGRC SECKASISIR YPLVELACAA
LFAYCTMQWG ITPTGAAWCL FSAALLSLAL IDWDTTLLPD DITLPLLWAG LLSSALHWTA
VTLADAVWGA AVGYLSLWLV YWAFKLATGK EGMGYGDFKL FAALGAWFGW QALVPIILIS
SVIGAVVGIA LKINSRLREG GYVPFGPFLA GAGFAAMVFG PQQMLQSLLA AIGL
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