| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5487 |
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| Symbol | |
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| ID | 5751105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6090858 |
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| End bp | 6091937 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641300618 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001566501 |
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| Protein GI | 160900919 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.057481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.26211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT CCCACCCCGC GCCCAATCTA CCGCCAGGGC CGGCCGCAGG CGGGATCGCT
CTTCCTATAA TTGCCGATCC ACTTGGCGGC CACAGTACCT TGACCACAGC TCTCTCCACC
CCCAATCCGC TTGCCCTGAT CACTGACGAC ATGCGCGAGG TGGATCATGT GATCGCCCAG
CGCCTGACGA CCACCGTCCC GCTGATTGCC CAGATCTCCC AGTACATCAT CGCTGCCGGC
GGCAAACGCC TTCGCCCGGC CCTGCTGCTC ATGGTCTGCA ATGCGCTGGG CTACGAAGGC
AGGGACAGGC ATGTCCTGGC GGCCGTGGTC GAGCTGATTC ATACCGCCAC CTTGCTGCAC
GACGACGTGG TGGACGAGTC CACCCTGCGC CGTGGCCGCC CGACGGCCAA CGAGACCTTC
GGCAATCCGG CCAGCGTGCT GGTCGGCGAC TTCCTGCACT CGCGCTCCTT CCAGATGATG
GTGGAGGTGG GCAGCATGCG TGTGCTCAAG ATTCTCTCGG ACGCCACCAA CGTGATCGCC
GAGGGCGAGG TGCAGCAGCT CATCAACACG CACGATGCCT CGCTGGACGA AGCCGGCTAC
CTGCACGTCA TCCGCTCCAA GACCGCCCAG TTGTTCGAGG CCAGCGCCCA GTTGGGCGCC
GTGCTGGCCG ACGCCCCCCG CGAGATCGAA CAGGCCTGCG CCATCTATGG CCAGGCCCTG
GGCACCGCCT TCCAGATCAT TGACGACGTG CTCGACTACA CGGGCGACAC CCAGGAAATG
GGCAAGAACC TGGGCGACGA CCTGCGCGAA GGCAAGTGCA CCCTGCCGCT GATTGCCGCC
ATGCAGCGCG GCACTCCGGA GCAGGCTGCC ATCGTGCGCA ACGCCATCGA GCAGGGCTCA
ACCGAGCAGT TGTCTGCCGT TGTGGATATC GTGCGCAGCA CAGGCGCGCT GGATGTGGCA
CGCGAAGCCG CCCATGCCGA GGCACGCCGC GCCATTGACG CAATAAATGT GCTCCCGAGC
AATTTGCATA CGGCAAGTTT GCTACAATTA GCCTCTCAGC TTTTGGAGCG ACGCACCTGA
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| Protein sequence | MKRSHPAPNL PPGPAAGGIA LPIIADPLGG HSTLTTALST PNPLALITDD MREVDHVIAQ
RLTTTVPLIA QISQYIIAAG GKRLRPALLL MVCNALGYEG RDRHVLAAVV ELIHTATLLH
DDVVDESTLR RGRPTANETF GNPASVLVGD FLHSRSFQMM VEVGSMRVLK ILSDATNVIA
EGEVQQLINT HDASLDEAGY LHVIRSKTAQ LFEASAQLGA VLADAPREIE QACAIYGQAL
GTAFQIIDDV LDYTGDTQEM GKNLGDDLRE GKCTLPLIAA MQRGTPEQAA IVRNAIEQGS
TEQLSAVVDI VRSTGALDVA REAAHAEARR AIDAINVLPS NLHTASLLQL ASQLLERRT
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