Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5476 |
Symbol | prfA |
ID | 5751094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6080433 |
End bp | 6081515 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641300607 |
Product | peptide chain release factor 1 |
Protein accession | YP_001566490 |
Protein GI | 160900908 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACT TTCTGCGCCA ACAACTGGAG CGCTACGCCC AGCGCCTTGA AGAACTCAAC TTCCTGCTTT CGCGCGAAGA CATCATGGGC GACATGAAGC AGTACCGCGC CATCTCGCGC GAGCACGCGG ACGTCACCGC CATTGCAGGC CGCTATGCGC GCCACCGCCA GCGCGAGGCC GATCTGGCGG CTGCGCAGGA CATGCTCTCC GACCCCGACA TGGCCGACAT GGCGCAGGAG GAAATCGCCA GCGCCGAGGC CGAGCTGGTC CAGCTGGAGG ACGAACTGCA GCGCCTGCTG CTGCCCAAGG ACCCCGATGA CGCGCGCAAC GCCTACCTCG AAATCCGCGC AGGCACGGGC GGCGACGAAT CGGCCCTGTT CGCAGGCGAC CTGGCCCGCA TGTACACGCG CCACTGCGAC GCCGTGGGCT GGAAGGTCGA GATCATGAGC GCCAATGAGA GCGAGCTGGG CGGCTACAAG GAAGTGGTGT TGCGCGTGGA AGGCACGGAT GTGTACGGTC GCCTGCGCTT CGAATCCGGC GGACACCGCG TGCAGCGCGT GCCGGCCACC GAGACCCAGG GCCGCATCCA CACCAGCGCC TGCACCGTGG CCGTCATGCC CGAGCCGGAC GAAACCCAGG CCATCACGCT CAACCCGGCC GACCTGCGCA TCGACACCTT CCGCGCCAGC GGCGCCGGCG GCCAGCACAT CAACAAGACC GACTCGGCCG TGCGTGTGGT CCACCTGCCC ACGGGCATCG TCGCCGAGTG CCAGGACGGC CGCAGCCAGC ACAGCAACAA GGCCAAGGCC CTGCAGGTGC TGCAGGCGCG CCTGCAGGAG AAGGAACGCA GCGAGCGCGA AGCCAAGGAG GCCGCACTGC GCAAGGGCCT GATCGGCAGC GGCGACCGCA GCGACCGCAT CCGCACCTAC AACTTCCCGC AGGGCCGGCT CACCGACCAC CGCATCAACC TCACCATCTA CAAGCTGCTG GCCGTGATGG AAGGCGACCT GGGCGACGTG CTCGACGCGC TGCAGGCCGC ACGCGAGGCC GAACTGCTGG CCGAGCTGCA GGTCAACAAC TGA
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Protein sequence | MQDFLRQQLE RYAQRLEELN FLLSREDIMG DMKQYRAISR EHADVTAIAG RYARHRQREA DLAAAQDMLS DPDMADMAQE EIASAEAELV QLEDELQRLL LPKDPDDARN AYLEIRAGTG GDESALFAGD LARMYTRHCD AVGWKVEIMS ANESELGGYK EVVLRVEGTD VYGRLRFESG GHRVQRVPAT ETQGRIHTSA CTVAVMPEPD ETQAITLNPA DLRIDTFRAS GAGGQHINKT DSAVRVVHLP TGIVAECQDG RSQHSNKAKA LQVLQARLQE KERSEREAKE AALRKGLIGS GDRSDRIRTY NFPQGRLTDH RINLTIYKLL AVMEGDLGDV LDALQAAREA ELLAELQVNN
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