Gene Daci_5464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5464 
Symbol 
ID5751082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6063533 
End bp6067447 
Gene Length3915 bp 
Protein Length1304 aa 
Translation table11 
GC content66% 
IMG OID641300595 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001566478 
Protein GI160900896 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.279541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAC CGATTGCGTT GGCAGCCCTG CAGGCACAGG CTGCCGAACC TGCACGTCTG 
CGAGAGATTC CCTACAACTA CACCTCGTTT TCCGATCGCG AGATCGTGAT CCGCCTGCTG
GGCACGTCCA TGTGGGATGT GCTCAACCAG CTGCGCCAGG AGCGGCGCAC GGGCCGCTCC
GCCCGCATGC TCTACGAGGT GCTGGGGGAC ATCTGGGTCG TTCAGCGCAA TCCCTACCTG
CAGGACGACC TGCTGCACAG TCCCGACCGC CGCAAGTCGC TGGTGGAGGC CCTGGAGCAC
CGCCTGGGCG AGATCGACAA GCGCCGTGCT CCGCAGCAGG ACCCCGTGCG CGATGCGCTG
GTGGGTCAAC TGGTGGATGC AGCGCGCCGC GCCGTGCATG AGTTCAACGC CACCTTCGTC
GAGGCCGAGC AACTGCGCCG CCGGGTGCAA AAGAGCCTGG GCCGCCACAC GGCCAAGGAC
AACATCAAGT TCGACGGCCT GTCGCGCGTG GCCCATGTGA CGGATGCCAC CGACTGGCGC
GTCGAATACC CCTTCGTCGT GCTCACCCCC GATACCGAAG CCGAGATGGC CGCCCTGGTG
CGTGCCTGTA TCGAGCTGCG CCTGACCATC ATTCCGCGCG GCGGCGGCAC GGGCTACACG
GGCGGCGCGA TCCCGCTGAC CTGGCGCAGC GTGGTGATCA ACACCGAAAA GCTCGAAGCC
ATGACCGAGG TGGAGATGCG CCGCATTCCC GGCGTGGACC ACGAGGTGCC CACCATCTTC
ACCGAAGCCG GCGTGGTCAC GCAGCGCGTG GCCGATGCGG CCGAGCGCGC GGGCTTCGTC
TTCGCCGTGG ACCCCACATC GGCCGAGGCC TCGTGCATCG GCGGCAACGT CGCCATGAAT
GCGGGCGGCA AGAAGGCCGT GCTCTGGGGC ACGGCGCTGG ACAACCTGGT GTCCTGGCGC
ATGGTGACGC CCGATGCGCA GTGGCTGGAA GTCACGCGCG TGGGCCACAA CCTCGGCAAG
ATCCATGACG CCGAGATGGC CAGCTTCGAG CTGCAGTACT TCGAGGCAGA CGGCAAGACC
CCCATCCGCA GCGAGCGGCT GGACATTCCC GGCCAGAAAT TCCGCAAGGA AGGCCTGGGC
AAGGACGTGA CCGACAAGTT CCTGTCAGGC CTGCCCGGCA TCCAGAAGGA AGGCTGCGAC
GGCCTGATCA CCAGCGCGCG CTGGGTGGTG CACCGCATGC CCGAGCACAC GCGCACGGTC
TGCATGGAGT TCTTCGGCAA CGCCAAGGAC GCCGTGCCCA GCATTGTCGA GATCAAGGAC
TTCATGTTCG CCGAGCAAAA GCGCTCGGGC GTGCTGCTGG CCGGCCTGGA ACACCTGGAC
GACCGCTACC TAAAGGCCGT GGGCTACGCC ACCAAGAGCA AGAAGGGCAA CGGCCATCTG
CCCAAGATGG TGCTGCTGGG CGACATTGCC GGCGACAACG CCGACGATGT GGCCCGCGTG
GCCGCCGAGG TGGTGCGCAT TGCCAACTCG CGCAACGGCG AAGGCTTCAC GGCCGTCAGC
GCCGAGGCGC GCAAGAAATT CTGGCTTGAC CGCAAGCGCA CGGCCGCCAT CTCGCGCCAC
ACCAACGCCT TCAAGATCAA TGAAGACGTG GTGATCCCGC TGCCCCGCAT GTGGGAGTAC
ACGGATGGCA TCGAGCGCAT CAACATCGAG CTGTCGCTGC GCAACAAGCT CAAGCTGTGC
GATGCGCTGA CGGACTTCTT CCAGCACGGC GACCTGCCGC TGGGCAAGCA GGACGATGCG
GGCGACATCC CCTCGGCCGA GCTGCTGGAG GACCGCGTGC AGCAGGCCCT GGCCCTGGTT
GTCGACGTGC GCACGCTGTG GCAGGGCTGG CTGGACGATG TCGAGAACCT CTTCCCGCAG
CTGCAGGACC ATACGCTGCG CGCCAGCTGG AAGACCCAGC TGAAGGCGCC CATGGCCCAG
ATCTTCGCGG GCGCGGCCTT CCAGCCTCTG CTGGCCGAAG TCAACGCCAT CCACCAGCGC
GTGCTCAAGG GCCGTGTCTG GGTGGCGCTG CACATGCACG CCGGCGACGG CAACGTGCAC
ACCAACATTC CGGTCAACAG CGACGACTAC GAGATGCTGC AGACCGCCCA TGAGGCCGTG
GCACGCATCA TGGTGCTTGC GCGCCATCTG GACGGCGTGA TCTCGGGCGA GCACGGCATC
GGCATCACCA AGCTGGAATT CCTCAGCGAC GACGAGCTGG CCCCCTTTGC CGCCTACAAG
CAGCGCGTGG ACCCCGAAGG CCGCTTCAAC AAGGGCAAGC TGATCCGCAA CGAGAAGCTG
CAGGCCGTGG TGGGCCAGAG CCATGACGGC CGCTCGCCGC GCGAATCGCT GATGTTCGCC
GACCTGACCA ACGCCTACAC GCCCAGCTTC GGCCTGATGG GGCACGAGTC GCTGATCATG
CAGCAGAGCG ATATCGGCGC CATCGCCGAC TCGGTCAAGG ACTGCCTGCG CTGCGGCAAG
TGCAAGCCCG TGTGCGCCAC CCACGTGCCG CGCGCCAACC TGCTGTACAG CCCGCGCAAC
AAGATCCTGG CGACCTCGCT GCTGGTCGAA GCCTTCCTCT ACGAGGAGCA GACGCGCCGC
GGCGTGTCGC TGCGCCACTG GCAGGAGTTC GAGGACGTGT CGGACCACTG CACGGTCTGC
CACAAGTGCT TCAACCCCTG CCCGGTGAAG ATCGACTTCG GCGACGTGAC CATGAACATG
CGCAACCTGC TGCGCAAGAT GGACAAGAAG AGCTTCCGGC CCGGCAACAA GCTGGCGATG
GCCATGCTCA ACGCCACCAA TCCGGACACC ATCAAGTTCA TGCGCTCGGC CATGGTCGGC
GTGGGCTTCA AGGCCCAGCG CCTGGCCTCC GACGTGCTGC ACAGCCTGGC CAGGAAGCAG
ACCCAGCGCC CGCCCGCCTC GGTGGGGCGC GCTCCCCTCA AGGAGCAGGT GATCCACTTC
GTCAACAAGA AGCTGCCCGG CGGCCTGCCC AACAAGACGG CGCGAGCCCT GCTGGACATC
GAGGACAAGG ACTACGTGCC CATCATCCGC AGCCCGCAGA CCACGAGCGC GGACACCGAG
GCGGTGTTCT ACTTCCCCGG TTGCGGCTCC GAGCGCCTGT TCAGCCAGGT GGGCCTGGCC
ACCCAAGCCA TGCTCTGGCA TGCCGGCGTG CAGACCGTGC TGCCACCCGG CTACCTGTGC
TGCGGCTATC CCCAGCGCGG CAGCGGCCAG TTCGACAAGG CCGAGAAGAT GATCACGGAC
AACCGTGTGC TCTTCCACCG CGTCGCCACC ACGCTCAACT ACCTGGACAT CAAGACCGTG
GTGGTCAGCT GCGGCACCTG CTACGACCAG TTGCAGGGCT ACGAGTTCGG CAAGATCTTC
CCGGGCAGCC GCATCATCGA CATCCACGAG TACCTGCTGG AAAAGGGCGT GACGCTGCAG
GGCAAGGAGG GCTACCTCTA CCACGACCCC TGCCACTCGC CCATGAAGCT GCAGGACCCG
ATGAAGACCG TCAAGGCGCT GGTCGGTGAC GGCGTGGTCA AGAGCGAGCG CTGCTGCGGC
GAATCGGGCA CGCTGGGCGT CACGCGCCCC GACATCTCCA CGCAGATCCG CTTCCGCAAG
GAAGAGGAAC TCAAGAAGGG CGAGGCCGCG CTGCGCGCCA GCGGCGCCCT GGCCGAGAAG
GACAACGTGA AGATCCTCAC CAGCTGCCCC AGCTGCCTGC AGGGCCTGTC GCGCTACGGT
GGCGATATGA ACAACGGCCT GCTGGAAGCC GACTACATCG TGGTCGAGAT GGCGCGCCAG
ATCCTGGGCG AGAACTGGAT GGCCGAATAT GTTCAGCGCG CCAACGCCGG CGGCATCGAA
CGGGTTCTGG TCTGA
 
Protein sequence
MNVPIALAAL QAQAAEPARL REIPYNYTSF SDREIVIRLL GTSMWDVLNQ LRQERRTGRS 
ARMLYEVLGD IWVVQRNPYL QDDLLHSPDR RKSLVEALEH RLGEIDKRRA PQQDPVRDAL
VGQLVDAARR AVHEFNATFV EAEQLRRRVQ KSLGRHTAKD NIKFDGLSRV AHVTDATDWR
VEYPFVVLTP DTEAEMAALV RACIELRLTI IPRGGGTGYT GGAIPLTWRS VVINTEKLEA
MTEVEMRRIP GVDHEVPTIF TEAGVVTQRV ADAAERAGFV FAVDPTSAEA SCIGGNVAMN
AGGKKAVLWG TALDNLVSWR MVTPDAQWLE VTRVGHNLGK IHDAEMASFE LQYFEADGKT
PIRSERLDIP GQKFRKEGLG KDVTDKFLSG LPGIQKEGCD GLITSARWVV HRMPEHTRTV
CMEFFGNAKD AVPSIVEIKD FMFAEQKRSG VLLAGLEHLD DRYLKAVGYA TKSKKGNGHL
PKMVLLGDIA GDNADDVARV AAEVVRIANS RNGEGFTAVS AEARKKFWLD RKRTAAISRH
TNAFKINEDV VIPLPRMWEY TDGIERINIE LSLRNKLKLC DALTDFFQHG DLPLGKQDDA
GDIPSAELLE DRVQQALALV VDVRTLWQGW LDDVENLFPQ LQDHTLRASW KTQLKAPMAQ
IFAGAAFQPL LAEVNAIHQR VLKGRVWVAL HMHAGDGNVH TNIPVNSDDY EMLQTAHEAV
ARIMVLARHL DGVISGEHGI GITKLEFLSD DELAPFAAYK QRVDPEGRFN KGKLIRNEKL
QAVVGQSHDG RSPRESLMFA DLTNAYTPSF GLMGHESLIM QQSDIGAIAD SVKDCLRCGK
CKPVCATHVP RANLLYSPRN KILATSLLVE AFLYEEQTRR GVSLRHWQEF EDVSDHCTVC
HKCFNPCPVK IDFGDVTMNM RNLLRKMDKK SFRPGNKLAM AMLNATNPDT IKFMRSAMVG
VGFKAQRLAS DVLHSLARKQ TQRPPASVGR APLKEQVIHF VNKKLPGGLP NKTARALLDI
EDKDYVPIIR SPQTTSADTE AVFYFPGCGS ERLFSQVGLA TQAMLWHAGV QTVLPPGYLC
CGYPQRGSGQ FDKAEKMITD NRVLFHRVAT TLNYLDIKTV VVSCGTCYDQ LQGYEFGKIF
PGSRIIDIHE YLLEKGVTLQ GKEGYLYHDP CHSPMKLQDP MKTVKALVGD GVVKSERCCG
ESGTLGVTRP DISTQIRFRK EEELKKGEAA LRASGALAEK DNVKILTSCP SCLQGLSRYG
GDMNNGLLEA DYIVVEMARQ ILGENWMAEY VQRANAGGIE RVLV