| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5453 |
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| Symbol | aspS |
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| ID | 5751071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6051563 |
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| End bp | 6053365 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641300584 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001566467 |
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| Protein GI | 160900885 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGC GCTCCCATTA CTGCGGTCTA GTGACCGAAG CCCTGATGGG CGAAACCGTT
ACCCTGTGCG GCTGGGTGAA CCGTCGCCGC GACCATGGCG GCGTGATCTT CATCGACCTG
CGCGACCGCG AAGGCTATGT GCAGGTGGTC TGCGACCCCG ACCGTGCCGA GATGTTCAAG
ACTGCCGAAG GCCTGCGCAA CGAGTTCTGC GTGCAGGTCA AGGGCCTGGT GCGCGCACGT
CCCGAAGGCA CGACCAACGA CAAGCTCAAG AGCGGCCAGA TCGAAGTGCT GTGCCACGAG
CTGAACGTGC TCAACGCCTC GGTCACGCCC CCGTTCCAGC TGGACGACGA GAACCTGTCC
GAGACCGTGC GCCTGACCAA CCGCGTGCTG GACCTGCGCC GCCCCTACAT GCAGCGCAAC
ATGATGCTGC GCTACCGCAC GGCCATCCAG GTGCGCAACT TCCTGGACAA GGAAGGCTTC
ATCGACATCG AAACGCCCAT GCTGGGCAAG AGCACGCCCG AAGGCGCGCG CGACTACCTG
GTGCCCAGCC GCGTGCACGA CGGCGAGTTC TTCGCCCTGC CGCAGTCGCC CCAGCTGTAC
AAGCAGATGC TGATGGTGGC CGGCTACGAC CGCTACTACC AGATCACCAA GTGCTTCCGC
GACGAAGACC TGCGCGCCGA CCGCCAGCCC GAGTTCACGC AGATCGACTG CGAGACCTCG
TTCCTGGACG AAGAGGAAAT CCGCGCCATC TTCCAGCGCA TGATCACCGA GGTCTTCAAG
ACCCAGCTGG ACGTGGATCT GGGCGAGTTC CCGATGATGA CGTACCAGGA TGCGGCCTTC
CGCTTCGGCT CGGACAAGCC TGACCTGCGC GTCAAGCTCG AGTTCACCGA ACTGACCGAA
ATCATGAAGG ACGTGGACTT CAAGGTGTTC TCTACCCCCG CCACGACCAA GGGCGGCCGC
GTGGTCGCGC TGCGCGTGCC CGGCGGCTCG CAGATCTCGC GCGGCGAGAT CGACCAGTAC
ACCGAATTCG TCAAGATCTA CGGCGCCAAG GGCCTGGCCT GGATCAAGGT CAACGAAGTG
GCCAAGGGCC GCGATGGCCT GCAGTCTCCC ATCGTCAAGA ACCTGCATGA CGCGGCCATT
GCCGAGATCC TCAAGCGCAC GGGCGCACAG GACGGCGACC TCATCTTCTT CGGCGCCGAC
AAGGAAAAGA TCGTCAACGA CTCCATCGGC GCGCTGCGCC TGAAGGTGGG TCACAGCGAA
TTCGGCAAGG CCAACGGCCT GTTCGAGAAC CGCTGGGCGC CGCTGTGGGT GGTGGACTTC
CCCATGTTCG AGCACGACGA GGAAAACGAC CGCTGGGCGG CCGTGCACCA TCCCTTCACC
TCGCCCAAGG ACGGCCACGA GGAACTCATG GTCACCGACC CGGCCAACTG CCTGGCCAAG
GCCTACGACA TGGTCCTGAA CGGCTGGGAG CTGGGTGGCG GCTCGGTGCG TATCCACCGC
GCCGACGTGC AGAGCAAGGT GTTTGACGCG CTCAAGATCT CGCCCGAAGA CGCTCGCGCC
AAGTTCGGCT ACCTGCTGGA CGCGCTGCAG TACGGCGCGC CCCCGCACGG TGGCCTGGCC
TTCGGCCTGG ACCGCCTGAT CACGCTGATG ACGGGTGCCG ACTCCATCCG TGACGTGATC
GCCTTCCCCA AGACCCAGCG CGCCCAGGAC CTGCTGACGC AGGCACCTTC GCCCGTGGAC
GAAAAGCAGC TGCGCGAGCT GCACATCCGC CTGCGCAACC CGCTGGCGGC CACCCAGGGC
TGA
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| Protein sequence | MAMRSHYCGL VTEALMGETV TLCGWVNRRR DHGGVIFIDL RDREGYVQVV CDPDRAEMFK
TAEGLRNEFC VQVKGLVRAR PEGTTNDKLK SGQIEVLCHE LNVLNASVTP PFQLDDENLS
ETVRLTNRVL DLRRPYMQRN MMLRYRTAIQ VRNFLDKEGF IDIETPMLGK STPEGARDYL
VPSRVHDGEF FALPQSPQLY KQMLMVAGYD RYYQITKCFR DEDLRADRQP EFTQIDCETS
FLDEEEIRAI FQRMITEVFK TQLDVDLGEF PMMTYQDAAF RFGSDKPDLR VKLEFTELTE
IMKDVDFKVF STPATTKGGR VVALRVPGGS QISRGEIDQY TEFVKIYGAK GLAWIKVNEV
AKGRDGLQSP IVKNLHDAAI AEILKRTGAQ DGDLIFFGAD KEKIVNDSIG ALRLKVGHSE
FGKANGLFEN RWAPLWVVDF PMFEHDEEND RWAAVHHPFT SPKDGHEELM VTDPANCLAK
AYDMVLNGWE LGGGSVRIHR ADVQSKVFDA LKISPEDARA KFGYLLDALQ YGAPPHGGLA
FGLDRLITLM TGADSIRDVI AFPKTQRAQD LLTQAPSPVD EKQLRELHIR LRNPLAATQG
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