Gene Daci_5443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5443 
Symbol 
ID5751061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6042780 
End bp6043793 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID641300574 
Producthypothetical protein 
Protein accessionYP_001566457 
Protein GI160900875 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGA GCCGACGCGG CTGCCTGCGG GCAGCGCTGG CATGCGCTGC CAGCGCCTCA 
CTGGGCGCTG CCCTGGGAAC GGCATCGCCG ATCGCCTTTG CACAGCCGGC AGGCGGTGCC
TATCCGTCCA AGCCGCTGCG CATGGTGATT CCCTATCCGG CGGGGGGCGG CACGGACATC
ATCGGCCGCA TCATTGCCCA GCAACTGAGC CAGGCCTGGG GCCAGCCCGT GGTGGTGGAG
AACCGGCCGG GCTCCAGCGG CATCATTGGC GGCGACGTGG TGGCCAAGTC GGCGCCCGAT
GGCTATACGC TGCTGCTGGG GATCACGGCC ATGATCCAGT CGCCGGCGCT GTACGCCAAG
ATGCCTTATG ACGTGCTCAA GGACTTTGCC CCCGTATCTC AGGTGGCCCT GTCCTCGGAC
CTGTTCGTGG TGCCGCGCGA CGTGCCGGCC ACGACGCTGC AGGAGTTCAT CGCCCTGGTC
AAGGCCCATC CGGGCAAGTA CAGCAACGGT AACTACGGCA ACGGCACCTC CTCGCACATG
CATGGCGAGC TGCTGCGTGC CCGGGCCGGG CTGGATCTGG CGCTGATTCC CTACAAGGGC
GCGGCGCCGC TGGTCAACGA TGTGCTGGGC GGACAGCTGT CGTCGGCTTT CATCGACGTG
TCTTCGGCCA ATGCGCACCT GAAGTCGGAC AAGATCCGCA TCCTGGCCAT CACCGGCATG
CAGCGCCATC CGGCGCTGCC CGAGGTGCCC ACCTTTGCCG AGCTGGGGCT GGCGGGCTTC
GAGGCCAATG GCTGGTTCGC CACCTTCGTG GCGGCGGGAA CGCCCCGGCC CATCGTGGAC
AAGCTCTCGG CCGAGGTGCG ACGCATCGTG GCCTCGCCCG AACTCAGCGG GCGCCTGGCG
GCCATGGGGC TGCGCCCGGT GGGCGGCACG CCCGAGGAGC TGTCAGCGGC CATGGCGCGC
GACCTGCCGC GCTGGGCGCG CATCGTCAAG GATGCGGGAA TCAGGCTGGA GTAG
 
Protein sequence
MESSRRGCLR AALACAASAS LGAALGTASP IAFAQPAGGA YPSKPLRMVI PYPAGGGTDI 
IGRIIAQQLS QAWGQPVVVE NRPGSSGIIG GDVVAKSAPD GYTLLLGITA MIQSPALYAK
MPYDVLKDFA PVSQVALSSD LFVVPRDVPA TTLQEFIALV KAHPGKYSNG NYGNGTSSHM
HGELLRARAG LDLALIPYKG AAPLVNDVLG GQLSSAFIDV SSANAHLKSD KIRILAITGM
QRHPALPEVP TFAELGLAGF EANGWFATFV AAGTPRPIVD KLSAEVRRIV ASPELSGRLA
AMGLRPVGGT PEELSAAMAR DLPRWARIVK DAGIRLE