| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5409 |
|---|
| Symbol | |
|---|
| ID | 5751024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6002931 |
|---|
| End bp | 6003593 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641300537 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001566423 |
|---|
| Protein GI | 160900841 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4380] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA CCGATCACAT CAAGACCCTG GCTCTTGCCA TGACCGTGGC GCTGACCGGG
TGCGCCACCA CCGCGCCCTA TGACTATGCG GCGCTGCGGG CATCCAAGCC TGCCTCCATC
CTGGTCATGC CTGCGCTGAA CCAGTCCCCG GAAGTGAATG CGCCGGCGGG CGTGCTGTCC
CAGATCACGC TGCCGCTGGC CGAGGCCGGC TACTACGTTC TGCCCGTGGC TGTCACCGAG
GAAATGTTCC GCCAGAACGG CATCGTCAGC GCCGACGACG CCCAGGAACT GCCCGTGGCC
AAGCTCCGTG AAATCTTTGG CGCCGATGCG GCCCTGTACC TGAACATCCG CAATTACGGC
ACCAGCTACG CGGTGATCAG CAGCGCCTCC GTGGTCACGC TGGAGGCCAG GCTGGTGGAC
CTGCGCACCG GCACCCAGCT GTGGGATGGC AGTGCCACGG CCTCCAGCGC CGAAGGGCAA
AGCTCAGGCG GCGGACTGGT CGGCATCCTG GTGACGGCAC TGCTCAACCA GATCCTGGAC
ACCATGAACG ACCGCAGCGT GCAGATCGCC TCCATCGCCA ACCAGCGCCT GCTGTCGCCC
ATGGCGCAGC GCGGACTGCT GCCAGGCCCG CGCTCGCCCG ACTACGGCAA GCCGCGCAAC
TGA
|
|---|
| Protein sequence | MRLTDHIKTL ALAMTVALTG CATTAPYDYA ALRASKPASI LVMPALNQSP EVNAPAGVLS
QITLPLAEAG YYVLPVAVTE EMFRQNGIVS ADDAQELPVA KLREIFGADA ALYLNIRNYG
TSYAVISSAS VVTLEARLVD LRTGTQLWDG SATASSAEGQ SSGGGLVGIL VTALLNQILD
TMNDRSVQIA SIANQRLLSP MAQRGLLPGP RSPDYGKPRN
|
|---|
| |