| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5399 |
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| Symbol | |
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| ID | 5751014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5992432 |
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| End bp | 5993898 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300527 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001566413 |
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| Protein GI | 160900831 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.110775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.536808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT CAGCATGGAG TCGGATCCTG GACCTGGGTG GCGCAGGCCG CCAGGCGGAA
CTGGATGGGC AGTTGGCCGC CATCCACAAG TCCCAGGCCG TGATCGAGTT CGATCTGCAA
GGTCATGTGC TGGCCGCCAA CCAGAACTTC CTGGACACCA TGGGCTATGA GGAAGGCGAG
GTCATCGGCC AGCACCATCG CATGTTCGTG GACCACCAGA TGAGCGAGTC GCCCGAGTAC
GCGGCGTTCT GGCAGCGCCT GGGCAATGGC ATCCACGACG CGGGACGCTA CCGCCGCATT
GCCAAGGACG GGCGCGATGT CTGGCTGCAG GCCAGCTACA ACCCCATCTT CGATCGCCAT
GGCAGGCCCT TCAAGGTGGT GAAGTACGCC ACCGACATCA CCGAGCAGCA GCGCCGCAAC
GCCGACGCCG AAGGCCAGCT GGCCGCCATC TCCAAGGTGC AGGCCATCAT CGAGTTCGAC
CTGCAGGGCA ACATCCTGCA TGCCAACCGC CTGTTCCTGC AGGCCATGGG CTACACGCTG
GACGAGGTCG TCGGACGGCA CCACAGCATG TTCGTCCAGC CCCATGAACG CCACAGCCCC
GAATATGCGC AGTTCTGGCG CAAGCTGGCC AGCGGCCAGC ACGATGCGGG CCAGTACCTG
CGCATCGGCA AGCACGGCCG CCAGGTCTGG ATCGAGGCCA GCTACAACCC CATCCTCGAT
GCCGATGGCC GGCCGTTCAA GGTGGTCAAG TACGCCCGCG ATATCACGCG CCGCTTCACG
GCCGCGCAGA CCCTGGGCGA GGCCATGCAG GGCCTGAGCG AAAGCGCCGA GCACGCAGGC
CAGGCCAACG AACTGGCCCG CCAGGCCTGC CTGGTGGCCG AGCAGGGCGG GCGCACGGTG
CACGAGGTCA TGGGCACCAT GGAGTCCATC AGCGCCAGCT CGCGCAAGAT CAGCGACATC
ATCGGCGTGA TGGACGGCAT CGCCTTCCAG ACCAATATCC TCGCGCTCAA CGCTGCCGTG
GAGGCGGCCC GCGCAGGCGA GCAGGGCCGG GGCTTTGCCG TGGTGGCGGG CGAGGTACGG
GCACTGGCAC AGAACAGCGC CGCCGCCGCC AAGGAAATCA AGCAGCTCAT CCACACCTCG
GTGGAGCAGG TGGCACTGGG CGCCAATCAG GTGCGCCAGG CCGGGGGCAC CATGCAGGAG
ATCGTGGACT CCTCGCACCA GGTCACGGCC ATCATGGGCG ATGTGGTGCA GGCGTCCATG
GCCCAGTCGG CACGCCTGCG CGAGGTGACA GCCGACCTGA CGGCGCAGAG CGCGGCCGTC
GCGGATGCAT CCAGGGAACA GGTGCAGCGC AAGCCGCTGC CGGCATCCAT CGTTCCCGCT
GCGCCGCAGA TCAAGTCGGC CCCGGCAGCG GCCGTGCTTC CCGCAGGCGC CCAGCGCCTG
CCGGGCACCT TGCTGCGCAT GGCCTGA
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| Protein sequence | MKRSAWSRIL DLGGAGRQAE LDGQLAAIHK SQAVIEFDLQ GHVLAANQNF LDTMGYEEGE
VIGQHHRMFV DHQMSESPEY AAFWQRLGNG IHDAGRYRRI AKDGRDVWLQ ASYNPIFDRH
GRPFKVVKYA TDITEQQRRN ADAEGQLAAI SKVQAIIEFD LQGNILHANR LFLQAMGYTL
DEVVGRHHSM FVQPHERHSP EYAQFWRKLA SGQHDAGQYL RIGKHGRQVW IEASYNPILD
ADGRPFKVVK YARDITRRFT AAQTLGEAMQ GLSESAEHAG QANELARQAC LVAEQGGRTV
HEVMGTMESI SASSRKISDI IGVMDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR
ALAQNSAAAA KEIKQLIHTS VEQVALGANQ VRQAGGTMQE IVDSSHQVTA IMGDVVQASM
AQSARLREVT ADLTAQSAAV ADASREQVQR KPLPASIVPA APQIKSAPAA AVLPAGAQRL
PGTLLRMA
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