Gene Daci_5389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5389 
Symbol 
ID5751004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5979584 
End bp5980486 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID641300517 
Producthypothetical protein 
Protein accessionYP_001566403 
Protein GI160900821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.716094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.38953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CGCTGAAGCC TTCCACCGCC GCCATCCTGA CGCTGCCGCC GCTGCTGTGG 
GCCGGCAATG CCATCGTGGG CCGCATGGTC CATGACCTGA TCTCGCCCTT CGCGCTGAAT
TTCCTGCGCT GGGCCATTGC CTTCATGCTG CTGCTGCCGC TGGCGGGATG GGTGCTGCGC
CGGGACAGCG CCGTCTGGCC GCAGTGGCGC CAGTTCGCGC TGCTGGGATT GCTGGGCATC
GGCTGCTACA ACGCCCTGCT GTACCTGGCA CTGAAAACAT CGACGCCTCT GAACGCCACC
CTGGTCGGCT CCAGCATGCC GGTGTGGATG CTGGCCGTGG GCCGCATCTG CTGGGGCATT
GCCGTGAGCC GCCGCCAGTT GCTGGGGGCT GCGCTGTCGG TGCTGGGCGT GGCCGTGGTG
CTGTCGCGCG GTGATCCGCA GGTGCTGCGC CAGCTGCAGC TGGTGCCGGG CGACCTGTTC
ATGGTGCTGG CCACGATCCT GTGGGCCTTC TATACGTGGC TGCTGTCCAG GACCAGCGTG
TCAGGACAGC TGCGCGCGGA CTGGTCGGGC TTTCTGCTGG CACAAATGGT CTTCGGCCTG
ATGTGGTCCG GCCTGTTCAC GGGACTGGAG GCCGCATCGG GACGGTTTCA CCTTCAGGCA
GGGTGGCCGC TGCTGGGCGC CCTGCTGTTC ATCGCCGTCG GGCCGGCCAT CCTGGCCTAT
CGCTTCTGGG GCCTGGGCGT GCAGCGCAGC AGCCCTGCGG TGGCGGGCTT CTTCGGCAAT
CTGATGCCCC TGTTCACCGC CCTGCTGTCC ATTCCGCTGC TGGGCCAGAC GCCGCAGCTG
TACCACGGGC TGGCCTTCGC GCTCATCGTG GGCGGCATCA TGGTGTCTTC GCGCCGGGCA
TAG
 
Protein sequence
MSQPLKPSTA AILTLPPLLW AGNAIVGRMV HDLISPFALN FLRWAIAFML LLPLAGWVLR 
RDSAVWPQWR QFALLGLLGI GCYNALLYLA LKTSTPLNAT LVGSSMPVWM LAVGRICWGI
AVSRRQLLGA ALSVLGVAVV LSRGDPQVLR QLQLVPGDLF MVLATILWAF YTWLLSRTSV
SGQLRADWSG FLLAQMVFGL MWSGLFTGLE AASGRFHLQA GWPLLGALLF IAVGPAILAY
RFWGLGVQRS SPAVAGFFGN LMPLFTALLS IPLLGQTPQL YHGLAFALIV GGIMVSSRRA