Gene Daci_5385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5385 
Symbol 
ID5751000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5975174 
End bp5975689 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID641300513 
Productlipoprotein signal peptidase 
Protein accessionYP_001566399 
Protein GI160900817 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.37962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTA CCTTTGCTGC GGTCCCCGAA TCCCGCAACA GCCGCATCTG GCCCTGGCTG 
GCCTGGTCGC TGGCGATCAT CGCCATCGAC CAGCTCACCA AGCAGTGGAT CCTTGGTGCC
TACCAACTGG GCGACTGGAC GCCGATCACG GGCTTCTTCA ACATCGTGCG GGCCCACAAC
ACGGGCGCGG CCTTCTCGTT CCTGGCCGGA GCGGGCGGCT GGCAGCGCTG GCTGTTCGTG
GGCATCGGCG TGGCGGCCAC GCTGCTCATC GTCTGGCAGT TGCGCAAGCA TCCGGGGCAG
AAGCTGTTTT GCTTCTCGCT GGCCAGCATC CTGGGCGGCG CCATCGGCAA CGTGGTGGAC
CGCCTGCAGC ACGGCTACGT GGTGGACTTC CTGGACTTCT ACTGGGGCCG TTCGCACTTT
CCGGCCTTCA ATGCCGCCGA CATCGCCATC AGCGTGGGGG CGGCCCTGCT GATCCTGGAC
GAGGTGCTGC GCGCACGGCG GGCCAAAAGA ACCTGA
 
Protein sequence
MTPTFAAVPE SRNSRIWPWL AWSLAIIAID QLTKQWILGA YQLGDWTPIT GFFNIVRAHN 
TGAAFSFLAG AGGWQRWLFV GIGVAATLLI VWQLRKHPGQ KLFCFSLASI LGGAIGNVVD
RLQHGYVVDF LDFYWGRSHF PAFNAADIAI SVGAALLILD EVLRARRAKR T