| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5370 |
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| Symbol | |
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| ID | 5750985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5955377 |
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| End bp | 5956789 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300498 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001566384 |
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| Protein GI | 160900802 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.503548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGCTG CGCCAGCCGG GGGCTGCTGC GGGTTCCGAC CTGTGGCCCT CTCGGATTTG
CAAGGCAGTG GGACAATTGC GCCCATGCAT CCCAAACAGC TTCTCGACGC CTGCGCCGAA
CTGGTCAAGC GCACCCTGAC TTTCGAACAC CCGGCCGACG CCGTGGTGTC ACGCTTTTTC
CGTGAAAACC GCAACCTGGG CCCGCGCGAG CGTGCCGCGC TGGCCGAAAC CGCCTACACC
GTGCTGCGCA AGAAGCTGCT TTTTGAGAGC CTGGCACGTT CTGGCAGCGG CTCGCGTGAG
CGCAGACTGG CCATCCTGGG CTTTGCCCAT AGCCAGGAAG CCCTGGCCCG CGTGGCCGGC
AAGTCCGAGC AGGGCGTCAA GGAGGCGCTC GGCTTTGCGC GCGCGGCGCT GTCCCCCCAG
GAACTGCAAT GGCTGGACGC CTGCGATGCC GTGCGCCCCG ATGAGCTGAT GGAGCCGCAC
CGCCACAACC TGCCCGAGTG GCTGGTCGCG CCGCTCAAGC AGCAGCTGGG TGAAGATTTC
TGGGCCTTTG CCCAGAGCAT GGAGCAGGCC GCACCGCTGG ATCTGCGCGT CAATGCGCTG
AACGCCAAGC GCGCCGATGT GCAAAAGGAA CTGGCCGATG CCGGCATCGC CGCCGAAGCC
ACGCCGTACT CGCCCTGGGG CCTGCGCGTG CAGGGCAAGC CTGCGCTGGC CCGGCTGGAC
GCCTTCACGC GCGGCGCCAT CGAGGTGCAG GATGAAGGCT CCCAGCTGCT GGCGCTGATG
CTGGACGCCA AGCGCGGCGA AATGGTGGTC GATTTCTGCG CCGGCGCAGG CGGCAAGACC
CTGGCCATTG GCGCGTCCAT GCGCAGCACG GGGCGCCTGT ACGCCTTCGA TGTGTCCGGC
CACCGGCTCG AAGCCCTGAA GCCGCGCCTG GCGCGCTCGG GCCTGTCGAA CGTGCACCCC
GCGGCCATCG CCCATGAGCG CGACGACCGC GTCAAGCGCC TAGCCGGCAA GATCGACCGC
GTGCTGGTCG ATGCGCCCTG CTCGGGCCTG GGCACGCTGC GCCGCAATCC CGACCTCAAG
TGGCGTCAGT CGGCCAAGGC CATCGAGGAG CTCACGCAAA AGCAGGCGGC CATCCTGGCC
AGTGCAGCGC GTCTGGTCAA GCCGGGTGGG CGTCTGGTCT ATGCCACCTG TTCGGTCCTG
CCCCAGGAAA ACGAAGCCAT CGCCGAGGCC TTTGCATCGG AGCACTCTGA CTTCGTGGCC
ATGGATGCCG GCGAACTGCT GGCCCAGCTC AAGGTGGAGC AGGGCAATGC GCTGTGCAGC
GGCGGCGAGA CCGGCACGCA GTACCTGCGC CTGTGGCCGC AGCGCCATGA GACGGACGGA
TTTTTCGCCG CCGTTTGGAC CCGGAAGCCG TAA
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| Protein sequence | MVAAPAGGCC GFRPVALSDL QGSGTIAPMH PKQLLDACAE LVKRTLTFEH PADAVVSRFF
RENRNLGPRE RAALAETAYT VLRKKLLFES LARSGSGSRE RRLAILGFAH SQEALARVAG
KSEQGVKEAL GFARAALSPQ ELQWLDACDA VRPDELMEPH RHNLPEWLVA PLKQQLGEDF
WAFAQSMEQA APLDLRVNAL NAKRADVQKE LADAGIAAEA TPYSPWGLRV QGKPALARLD
AFTRGAIEVQ DEGSQLLALM LDAKRGEMVV DFCAGAGGKT LAIGASMRST GRLYAFDVSG
HRLEALKPRL ARSGLSNVHP AAIAHERDDR VKRLAGKIDR VLVDAPCSGL GTLRRNPDLK
WRQSAKAIEE LTQKQAAILA SAARLVKPGG RLVYATCSVL PQENEAIAEA FASEHSDFVA
MDAGELLAQL KVEQGNALCS GGETGTQYLR LWPQRHETDG FFAAVWTRKP
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