Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5362 |
Symbol | |
ID | 5750977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5946940 |
End bp | 5947575 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641300490 |
Product | outer membrane lipoprotein carrier protein LolA |
Protein accession | YP_001566376 |
Protein GI | 160900794 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGTC TGTTGACTGC AGTTGTGATC GCGGCAAGCG CGACGGCCTC GTGGGCCGAT GGCCTCAAGA GCCTGGAAGC CTTCATGAAG AATTCCCAGG CCGGCCGCGC CGAATTCACC CAGGCCGTCA CGGCCCCGTC CAAGGATGGC CAGCCGCCAC GCACCAAGAA CTCCAGCGGC CAGTTCGAAT TCCAGCGTCC CGGCAAGTTC AGGTTCGTCT ACACCAAGCC GTTCGAGCAG ACCATCGTCG CCGACGGCAA GACACTGTGG CTTTATGACG CCGACCTCAA CCAGGTCACG CAGCGCCCCC AGGCCCAGGC CCTGGGCAGC ACGCCGGCCG CCATCCTGGC GTCGGCCAAC GATCTCAAGG CGTTGAGCGC CGACTTCGAT CTGCAGTCCG CGCCCGAGCA GGATGGCCTG CAATGGGTCC AGGCCAGCCC CAAGGACAAG AACGGCCAGC TCAAGAGCGT GCGCGTGGGC TTTGCGGCCG ATGGCCAGCT TTCGGCGTTG GACATCCTGG ACAGCTTTGG CCAGCGTTCG CTGATCCGCT TCAACCAGTT GCAGACCCAG GCGTCCCTGC CGGCCTCGAC TTTCGATTTC AAGGTGCCAG CGGGCGCCGA CGTGCTCAAG CAGTAA
|
Protein sequence | MKRLLTAVVI AASATASWAD GLKSLEAFMK NSQAGRAEFT QAVTAPSKDG QPPRTKNSSG QFEFQRPGKF RFVYTKPFEQ TIVADGKTLW LYDADLNQVT QRPQAQALGS TPAAILASAN DLKALSADFD LQSAPEQDGL QWVQASPKDK NGQLKSVRVG FAADGQLSAL DILDSFGQRS LIRFNQLQTQ ASLPASTFDF KVPAGADVLK Q
|
| |