| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5306 |
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| Symbol | |
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| ID | 5750918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5876614 |
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| End bp | 5877909 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641300431 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001566320 |
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| Protein GI | 160900738 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.457023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCC ATGCCTTCCT CAAAACCCTT GCAGCCGCTG CCGCCGTGGC CGCCACGGGC
CTGCTGAACA CCGCCAGCGC GCAGACGCCG CTGGAGGTGC CGTTCTACTA CCCCGTGGCC
GTGGGCGGCC CCATCACCAA GGTGATCGAC GGCTATGCGG CCGAGTTCAA CAAGGCCCAT
CCGCAGTACC GGATCACGCC CGTCTACGCG GGCACCTACC AGGAGACCAT CGTCAAGGCG
CTGACGGCCC ACAAGTCGGG CAAGCCGCCG GCCAGCTCGG TGCTGCTGTC CACCGACATG
TTCACGCTGA TCGACGAGGA CGCCATCGCC CCCATCGACG ACTTCGTGAA GACCGATGCC
GACCGGGCCT GGCTCAAGGG CTTCTACCCG GCCTTCATGG CCAACAGCCA GGCGGGCGGC
AAGACCTGGG GCGTGCCCTT CCAGCGTTCC ACCGTGGTCA TGTACTACAA CAAGGAAGCC
TTCAAGGAAG CCGGCCTGGA CCCGAACAAG GCGCCGCAGA ACTGGAAGGA ACTCAAGGAA
GCCGCCCACA GGCTGACGAA GAAGGACGCC AGCGGCAAGG TCGTGCAGTA CGGCATACAG
ATCCCGTCCA CGGGCTTTGC CTACTGGATG CTGCAGACCC TGACCACGCC CAATGACGTG
CTGCTGGCCA ACGAGGCCGG CACCCAGGTC ACGCTGGACA GCCCCCGGGT AGTGGAGGCG
CTGGACTTCT GGGTGGGCCT GGTCAAGGAA GGCGTGCACC CGGCCGGCGT GGTGGAGTGG
GGCACGACGC CCAAGGACTT CATGGAAAAG AAGGCCGCCA TCATCGTCAC CACCACGGGC
AACCTGACCA ATATCCGCGC CAATGCCAAA TTCGACTTCG GCGTGGGCCA GATCGCAGGC
AACGTGCGCA AGGGCTCGCC CACGGGCGGC GGCAATTTCT ACCTGTTCAA GAAGGCGCCC
CGGGAGCAGC AGGAGGCGGC CTTCCAGTTC ATGAAGTGGG TCACCCAGCC CCCGCTGGCC
GCGCAGTGGA GCATGGACAG CGGCTACGTC GCCGTCTCGC CCGCCGCCTA TGACACGCCC
GCGCTCAAGA AGTACGGCCA GGACTTCCCG CAGGCCCTGG TGGCGCGCGA CCAGCTGCCC
GTGTCGGTGG CCGAGTTCTC CACGCATGAG AACCAGCGCG TGACCAAGGT GCTCAACGAC
GCCGTGCAGG CCGCCCTCAA CGGCAGCAAG ACCTCGGCCC AGGCCCTGCA GGATGCGCAA
AAGGAAGCAG ACCGCATCCT GCGCCGCTAC AAGTGA
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| Protein sequence | MQRHAFLKTL AAAAAVAATG LLNTASAQTP LEVPFYYPVA VGGPITKVID GYAAEFNKAH
PQYRITPVYA GTYQETIVKA LTAHKSGKPP ASSVLLSTDM FTLIDEDAIA PIDDFVKTDA
DRAWLKGFYP AFMANSQAGG KTWGVPFQRS TVVMYYNKEA FKEAGLDPNK APQNWKELKE
AAHRLTKKDA SGKVVQYGIQ IPSTGFAYWM LQTLTTPNDV LLANEAGTQV TLDSPRVVEA
LDFWVGLVKE GVHPAGVVEW GTTPKDFMEK KAAIIVTTTG NLTNIRANAK FDFGVGQIAG
NVRKGSPTGG GNFYLFKKAP REQQEAAFQF MKWVTQPPLA AQWSMDSGYV AVSPAAYDTP
ALKKYGQDFP QALVARDQLP VSVAEFSTHE NQRVTKVLND AVQAALNGSK TSAQALQDAQ
KEADRILRRY K
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