| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5289 |
|---|
| Symbol | |
|---|
| ID | 5750901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5858703 |
|---|
| End bp | 5859530 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641300414 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_001566303 |
|---|
| Protein GI | 160900721 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTT CCCGACACCC CGAACTGCTG GACCGGCTGG CCGCCGCTTA CGCCCTGGGC
ACGCTGCGGG GCGCGGCACG CCGCCGCTTC GAGCAACTGG CCCGTGACCA GGCCCCGGTG
CGCGCCGCCG CCCTGCTGTG GCAGGGCCGC TGGTCGGCCC TGTCCGAAAT GCAGGCGCCC
GTGCGCCCTG ACGATGCGGT CTGGGTCCGT ATCGACAACC TGCTGCAGGC CGAAAAGGCC
CGCGCCGCCC AGGCGCACCG GCGGCGCGCC GACGATGCGC CTGGCATGGC CCGGCGCACG
GAAGCCGCCG TGGGCCGCGC CCTGGCCTGG TGGCGCGGCG CCGCCGTGCT GGGCGCCTGC
GCCACCGTGG CGGCCGTGGC CGTGGGGCTG TGGTCGCACC AGGACCTGCG CCAAAGTGGC
GAGCGCCAGC TGGCCGTGCT GAACAACCAG TTGCAGGCCA CCCAGGCTGC GCTGCAGGCC
GCGCCCCAGA TCCAGTACGT GGCCGTGCTG GCCGACGACA AGGCCGATGC CTCCATGCTC
GTGACCTTCG ACCCCGGCAA GAACACCCTG GTGCTGCAGC GCGTGGGCGA CTTCCATGAG
GCCTCCGACA AATCACTGCA GCTGTGGGCC CTGCCGCCCC AGGGCGGCCC GCAATCGCTG
GGCGTGCTGG GACGCGACAA GCTGGTCAAG CTGACCGCCG CGGCCGCCGA GGTCCAGGGC
GTGCCTGCCC TGGCCATCAG CCTGGAGCCC AAGGGCGGCG TGCCCAGCCA GACCGGGCCC
ACGGGACCGG TGCTGTTCAA GGGCGCTCTG ATCCGGCGCG ACCTGTAG
|
|---|
| Protein sequence | MNISRHPELL DRLAAAYALG TLRGAARRRF EQLARDQAPV RAAALLWQGR WSALSEMQAP
VRPDDAVWVR IDNLLQAEKA RAAQAHRRRA DDAPGMARRT EAAVGRALAW WRGAAVLGAC
ATVAAVAVGL WSHQDLRQSG ERQLAVLNNQ LQATQAALQA APQIQYVAVL ADDKADASML
VTFDPGKNTL VLQRVGDFHE ASDKSLQLWA LPPQGGPQSL GVLGRDKLVK LTAAAAEVQG
VPALAISLEP KGGVPSQTGP TGPVLFKGAL IRRDL
|
|---|
| |