| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5281 |
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| Symbol | |
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| ID | 5750893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5846797 |
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| End bp | 5847885 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641300406 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001566295 |
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| Protein GI | 160900713 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0773013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGA CCTGCCTGTG CGGGGAAATG GTTGTTTGGA CTAAACTCCA TGAGAATCAA
CCACTTATAA ATAGTTCGGC ACAGGTGAAA CACATTATAG AGGGCAAACC GGCAGACGAC
CGTTCCCTGA ACGCAGCCAC TGCCGCAGTG CGGCTGATCG AAGTCGATGA CGATTCGGCC
GGACAGCGGT TGGACAACTT TCTCATACGC CATCTCAAGG GCGTTCCCAA GACCCATGTC
TATCGCATCA TCCGCAGTGG AGAAGTGCGC ATCAACAAAG GGCGCGTCAG TGCGGAAACC
CGCGTTTCTA CCGGCGATAT CGTCCGCATA CCGCCCGTGC GCATTTCCGA AAAAGTCGCC
GAAAAGGCCG AGCGGCCAGC GCCAGCCAGG GATTTCCCCA GTCTGCTGGA AGACGAGCAC
CTGATCGCCA TCGACAAGCC CGCCGGTGTG GCCGTGCATG GCGGATCGGG TGTGAGTTTT
GGTGTCATCG AGCAACTGCG CCAGGCGCGG CCGCAAAGCC GTTTTCTGGA GCTGGTGCAT
CGGCTCGACC GCGAGACATC CGGCATCTTG CTGGTGGCCA AGAAGCGCTC GGCGCTGACG
CATCTGCAGG ACCAGTTCCG CGAGCGCGAG ACCGGCAAGA CCTACCTGGC CCTGGTCCAG
GGCACCTGGC CGGCCAACCA CAAGGTGATT GATCTGCCGC TGCACAAATA CCTGCAGGCC
GACGGCGAAC GCCGCGTGCG GGTGACCACG GCCGATGATC CTGACGGCAT GCGCTCCGTC
ACGCTGGTGC GCGTTCGCAG CACGCTGGCG CCCCAGCCCC TGCTGGGACT GCCGGCCATG
AGCCTGCTGG AGGTGACCAT CAAGACCGGG CGCACGCACC AGATCCGCGT GCACCTGTCC
AGCCAGGGGC ACCCGATTGC GGGCGATGAC AAATATGGCG ACTTCGACCT GAACCGACGC
CTGCAGAAAC AGGGGCTCAA ACGCATGTTC CTGCACGCAT GGCGGCTACA GTTCACCCAC
CCGGCCAGTG GCGAGCGGGT GGAGCTGCGC GCCGAGCTTC CCGAAGAACT GGCCCGTTTC
GCCGGCTGA
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| Protein sequence | MASTCLCGEM VVWTKLHENQ PLINSSAQVK HIIEGKPADD RSLNAATAAV RLIEVDDDSA
GQRLDNFLIR HLKGVPKTHV YRIIRSGEVR INKGRVSAET RVSTGDIVRI PPVRISEKVA
EKAERPAPAR DFPSLLEDEH LIAIDKPAGV AVHGGSGVSF GVIEQLRQAR PQSRFLELVH
RLDRETSGIL LVAKKRSALT HLQDQFRERE TGKTYLALVQ GTWPANHKVI DLPLHKYLQA
DGERRVRVTT ADDPDGMRSV TLVRVRSTLA PQPLLGLPAM SLLEVTIKTG RTHQIRVHLS
SQGHPIAGDD KYGDFDLNRR LQKQGLKRMF LHAWRLQFTH PASGERVELR AELPEELARF
AG
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