Gene Daci_5208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5208 
Symbol 
ID5750820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5776809 
End bp5777753 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content69% 
IMG OID641300333 
ProductAraC family transcriptional regulator 
Protein accessionYP_001566222 
Protein GI160900640 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.360222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGGT ATGGCTGCGG GACCACAATC GCTGCCATGA CGCCCACGCC GCTGCCCGAG 
CTGCCCTCCA GCCACCTGTG CCAGGTGCTG TCACGCTCCA AGGCCCGACT GCAGCGGCGC
GTGCGCCTGA GCGAAGGGGT GGAGCTGGCC GTCTGGGCCA ATGTGGACGA CGAGGTGCGC
TACTGCCAGC CCGGTCACCA CACGCTGTCG GTCTACCTGG CCGGGGGCGA GGGCTCGCAG
CTCAAGGCGC GCCCCGAGGC CATGGGGGCG CCCGGGCGCA TCTGCATCTT CACGCCAGAG
GACGAATCGC ACTGGCTGGT GCGCTCGCCC GTGCAGTTCC TGCACCTGTA TGTGTCCGAC
CTGGCCTGGG CGGGGCGCGT GGTCCGCATG CTGGATGCCG AGCCCCGCTC GCGCACCTTG
CGTGCGCAGA TCTACGGGGA TGATCAGGCC TTCCACGCCG GTGCCCGTGC GCTGATGCAG
CTGGACTGGC AGGACCCGCA GCAGCAACTG GCGGCCGATG CCATTGGCCA GCAGCTGGTG
GACCGGCTGG TGCTGCAGTC CGCCACGCCG CGCCAGCTGC AGGCGCTGCA GCGGCCGCTG
GGCGGGCTTT CTGCGGCCAT GCGGCGCAGG GTGCTGGCCC ATGTCGAGGC GCATCTGCAT
GACTCCAAGG CCGTGTCGCT GCCGGCACTG GCGAAACAGG CCTGCCTCTC CGAATTCCAT
TTCGCACGCA TGTTCCGCCA GAGCATGGGC TGCACGGTGC ACGAATGGGT GCTGCAGCAG
CGCCTGGCCC GGGCACGGCG TGCCCTGTCT GCGCGCAACG TGCCGCCGCT GGCCGAGCTG
GCGCTGGATT GCGGCTTTTC CAGCGCCAGC CACCTGGTGC GCAGCTTCCG GGCGCATTTG
GGCGTTACGC CTACGCAGTT CTCGATCTTT CAGCGCAATG CTTGA
 
Protein sequence
MRRYGCGTTI AAMTPTPLPE LPSSHLCQVL SRSKARLQRR VRLSEGVELA VWANVDDEVR 
YCQPGHHTLS VYLAGGEGSQ LKARPEAMGA PGRICIFTPE DESHWLVRSP VQFLHLYVSD
LAWAGRVVRM LDAEPRSRTL RAQIYGDDQA FHAGARALMQ LDWQDPQQQL AADAIGQQLV
DRLVLQSATP RQLQALQRPL GGLSAAMRRR VLAHVEAHLH DSKAVSLPAL AKQACLSEFH
FARMFRQSMG CTVHEWVLQQ RLARARRALS ARNVPPLAEL ALDCGFSSAS HLVRSFRAHL
GVTPTQFSIF QRNA