Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5208 |
Symbol | |
ID | 5750820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5776809 |
End bp | 5777753 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641300333 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001566222 |
Protein GI | 160900640 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.360222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGGT ATGGCTGCGG GACCACAATC GCTGCCATGA CGCCCACGCC GCTGCCCGAG CTGCCCTCCA GCCACCTGTG CCAGGTGCTG TCACGCTCCA AGGCCCGACT GCAGCGGCGC GTGCGCCTGA GCGAAGGGGT GGAGCTGGCC GTCTGGGCCA ATGTGGACGA CGAGGTGCGC TACTGCCAGC CCGGTCACCA CACGCTGTCG GTCTACCTGG CCGGGGGCGA GGGCTCGCAG CTCAAGGCGC GCCCCGAGGC CATGGGGGCG CCCGGGCGCA TCTGCATCTT CACGCCAGAG GACGAATCGC ACTGGCTGGT GCGCTCGCCC GTGCAGTTCC TGCACCTGTA TGTGTCCGAC CTGGCCTGGG CGGGGCGCGT GGTCCGCATG CTGGATGCCG AGCCCCGCTC GCGCACCTTG CGTGCGCAGA TCTACGGGGA TGATCAGGCC TTCCACGCCG GTGCCCGTGC GCTGATGCAG CTGGACTGGC AGGACCCGCA GCAGCAACTG GCGGCCGATG CCATTGGCCA GCAGCTGGTG GACCGGCTGG TGCTGCAGTC CGCCACGCCG CGCCAGCTGC AGGCGCTGCA GCGGCCGCTG GGCGGGCTTT CTGCGGCCAT GCGGCGCAGG GTGCTGGCCC ATGTCGAGGC GCATCTGCAT GACTCCAAGG CCGTGTCGCT GCCGGCACTG GCGAAACAGG CCTGCCTCTC CGAATTCCAT TTCGCACGCA TGTTCCGCCA GAGCATGGGC TGCACGGTGC ACGAATGGGT GCTGCAGCAG CGCCTGGCCC GGGCACGGCG TGCCCTGTCT GCGCGCAACG TGCCGCCGCT GGCCGAGCTG GCGCTGGATT GCGGCTTTTC CAGCGCCAGC CACCTGGTGC GCAGCTTCCG GGCGCATTTG GGCGTTACGC CTACGCAGTT CTCGATCTTT CAGCGCAATG CTTGA
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Protein sequence | MRRYGCGTTI AAMTPTPLPE LPSSHLCQVL SRSKARLQRR VRLSEGVELA VWANVDDEVR YCQPGHHTLS VYLAGGEGSQ LKARPEAMGA PGRICIFTPE DESHWLVRSP VQFLHLYVSD LAWAGRVVRM LDAEPRSRTL RAQIYGDDQA FHAGARALMQ LDWQDPQQQL AADAIGQQLV DRLVLQSATP RQLQALQRPL GGLSAAMRRR VLAHVEAHLH DSKAVSLPAL AKQACLSEFH FARMFRQSMG CTVHEWVLQQ RLARARRALS ARNVPPLAEL ALDCGFSSAS HLVRSFRAHL GVTPTQFSIF QRNA
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