Gene Daci_5179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5179 
Symbol 
ID5750790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5745365 
End bp5745844 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content62% 
IMG OID641300303 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_001566193 
Protein GI160900611 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG GCGTGATGAA AGAAGGCTTC ATCACCACGA GTTACGACTC TGTGGTGAAT 
TGGGCCAAGA CGGGCTCGCT GTGGCCCATG ACATTTGGTC TGGCCTGCTG CGCGGTGGAG
ATGATGCACG CTGCGGCGGC GCGTTACGAC ATCGGTCGCT TTGGCTCGGA AGTCTTCCGT
GCCAGCCCGC GGCAGTCGGA CCTGATGATT GTGGCCGGCA CCCTGTGCAA CAAGATGGCG
CCCGCCATGC GCAAGGTCTA TGACCAGATG TCCGAGCCCC GCTGGGTCAT CTCCATGGGC
TCGTGCGCCA ACGGCGGCGG CTACTACCAC TACAGCTATT CCGTGGTGCG CGGCTGTGAC
CGCATCGTGC CGGTCGATGT CTATGTGCCT GGCTGCCCCC CCACGGCGGA AGCCCTGATC
TACGGCATCA TCCAGCTGCA GCAGAAGATC CGCCGCACCC ATACCATCGC TCGCGTCTAA
 
Protein sequence
MIEGVMKEGF ITTSYDSVVN WAKTGSLWPM TFGLACCAVE MMHAAAARYD IGRFGSEVFR 
ASPRQSDLMI VAGTLCNKMA PAMRKVYDQM SEPRWVISMG SCANGGGYYH YSYSVVRGCD
RIVPVDVYVP GCPPTAEALI YGIIQLQQKI RRTHTIARV