| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5136 |
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| Symbol | |
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| ID | 5750747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5691968 |
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| End bp | 5695276 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300260 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001566150 |
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| Protein GI | 160900568 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.891075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTG ACCGCAGGCG GCATGGGCCG CGCTTTGCCG TGGCGGAGCC AAACACCATG
AACCTATCCA AATTCTTCAT TGACCGGCCG ATCTTCGCAG GCGTGCTTTC GCTGCTGATG
CTGATCGCCG GCCTGATCGC CATGGGCGGG CTGCCGATCT CGGAATACCC CGAGGTCGCG
CCGCCGTCCG TGGTGGTGCG CGCCCAGTAT CCGGGCGCCA ATCCCAAGGT GATCGCCGAG
ACCGTGGCCA CGCCGCTGGA AGAGCAGATC AACGGCGTCG AAGGCATGCT CTACATGGGC
AGCCAGGCCA CCAGCGACGG CGTGATGACG CTGACCGTCA CTTTCCGCCT GGGCACCGAC
CCCGACAAGG CGCAGCAGAT GGTGCAAAAC CGCGTCTCGC AGGCCGAGCC GCGCCTGCCG
GAAGAGGTGC GCCGCCTGGG CATCACCACG GTCAAGAGCG CACCCGACCT GACCATGGTG
GTGCACCTGG TCTCGCCCAA CCAGCGCTAT GACATCAACT ACCTGCGCAA CTACGCAGTG
CTGAACGTGA AGGACCCGCT GGCGCGCATC GAGGGCGTGG GCCAGATCCA GATCTTCGGC
GGCGGCGACT ACGCCATGCG CGTGTGGCTG GACCCGCAGA AGGTGGCGCA GCGCGGCCTG
TCGGCCAGCG ATGTGGTGGC CGCCATCCGC GGCCAGAACG TGCAGGCTGC GGCCGGCGTG
GTCGGCGCCT CGCCGGGGCT GCCGGGCGTG GACATGCAAC TGTCCATCAA CGCCCAGGGC
CGCCTGCAAA GCGAGGAGGA CTTCGGCGAC ATCATCGTCA AGAGCGGCGC CGATGGCGCC
GTGACCCGCC TGCGCGACAT CGGCCGCCTG GAGATGGGCG CGGCCGACTA TTCGCTGCGC
TCGCTGCTGA ACAACGACCC GGCCGTGGGC ATGGGCGTGT TCCAGGCGCC GGGCTCCAAT
GCGCTGGAAA TCTCGGCCAA CGTGCGCAAG ACCATGGAGG CCCTGAACAA GAACATGCCC
GAGGGCCTGG AGTACCGCAT CGCCTACGAC CCCACGCAGT TCGTGCGCGC CTCCATCGAA
TCGGTGGTGC ACACGCTGCT GGAGGCCATC GTGCTCGTGG TGCTGGTGGT GATCCTGTTC
CTGCAGACCT GGCGCGCCTC CATCATCCCG CTGCTGGCCG TGCCGGTGTC GGTGATCGGC
ACCTTCGCCG TGCTGCATCT GCTGGGTTTT TCCATCAACG CGCTGAGCCT GTTCGGCCTG
GTGCTGGCCA TCGGCATCGT GGTGGATGAC GCCATCGTCG TGGTCGAGAA CGTGGAGCGC
AACATCGAGG CCGGTCTCAC GCCGCGCAAC GCCACCTACC GCGCCATGCG CGAAGTGTCC
GGGCCCATCA TCGCCATCGC CCTGGTGCTG GTGGCGGTGT TCGTGCCGCT GGCCTTCATC
AGCGGCCTCA CGGGCCAGTT CTACAAGCAG TTCGCGGTGA CGATCGCCAT CTCCACGGTG
ATCTCGGCCA TCAACTCGCT GACGCTGTCG CCCGCGCTGG CGGCCCTGCT GCTGCGCGGC
CACGATGCGC CCAAGGACGC GCTGACGCGC GGCATGGACC GGGCCTTCGG CTGGCTGTTC
CGCGGCTTCA ACCGCATGTT CCACCGGGGC TCCGAGGCCT ACAGCGGCGG CGTGGGCCGC
GTGATCTCCC GCAAGGCCCT GATGCTGGCC ATCTACCTGG CGCTGATCGC CGTGACCTTC
GGCCTGTTCA AGGCCGTGCC TTCGGGCTTC GTGCCCGCGC AGGACAAGCA GTACCTGATC
GGCTTTGCCC AGTTGCCCGA CGGCGCCACG CTGGACCGCA CGGACGAGGT GATCCGCCGC
ATGGGCGAGA TCATGAAGGA CAACCCCAAC GTGGAGGACA CCATCGCCTT CCCGGGCCTG
TCCATCAACG GCTTCACCAA CAGCTCCAAC TCGGGCATCG TCTTCGCCAC GCTCAAGCCC
TTCGACGAGC GCAAGCGCGC CGACCAGAGC GGCGGCGCCG TGGCCGGCCA GCTCAACCAG
GCCTTCGCAG GCATCCAGGA CGCCTTCATC GTCATGTTCC CGCCGCCACC CGTGGCGGGC
CTGGGCACGA CGGGCGGCTT CAAGCTGCAG CTGGAAGACC GCGCCTCCCT GGGCTATGAC
CAGATGGACG CGGCCGTGAA GGCTTTCATG GCCAAGGCCT ACCAGACGCC CGAGCTGACC
GGCATGTTCA CCAGCTGGCA GGTCAACGTG CCCCAGCTGT ATGCCGACAT CGACCGCACC
AAGGCGCGCC AGCTCGGCGT GCCGGTGACG GACATCTTCG ACACCATGCA GATCTACCTG
GGCAGCCTGT ATGCGAACGA CTTCAACAAG TTCGGCCGCA CCTACAGCGT CCGCGTCCAG
GCCGACGCGC CCTACCGCGC GCGTGCCGAG GACGTGGGCA TGCTCAAAGT GCGCTCCAGC
TCGGGCGAGA TGATTCCGCT GTCGGCGCTG ATGAAGGTGG ACTCCAGCTT CGGCCCCGAG
CGCGCCATGC GCTACAACGG CTACCTCACG GCCGACATCA ACGGCGGTGC CGCACCGGGC
TTCTCTTCGG GCCAGGCGCA GGACGCCATC AAGCGCATCG CGGCCGAGAC CCTGCCCAAG
GGCATCGACT TCGAATGGAC CGACCTGACC TATCAGGAAA TCCTGGCCGG CAATTCGGCG
GTGATCGTGT TCCCGCTGGC CCTGCTGCTG GTCTTCCTGG TGCTGGCCGC GCAGTACGAG
AGCCTGACCC TGCCGATTGC CATCATCCTG ATCGTGCCCA TGGGCCTGTT GGCGGCCATG
ACCGGCGTCT GGCTGTCGGG CGGCGACAGC AATGTCTTCA CGCAGATCGG GCTCATCGTG
CTGGTGGGGC TGAGTGCGAA GAACGCCATC CTGATCGTGG AGTTCGCGCG GGAGCTGGAG
TTCGAGGGCC GCACGCCCAT ACAGGCCGCC ATCGAGGCCA GCCGGCTGCG CCTGCGCCCC
ATCCTGATGA CCTCGCTGGC CTTCGTCATG GGCGTGCTGC CCCTGGTGCT GTCCACGGGC
GCGGGCTCGG AAATGCGCCG TGCCATGGGC GTGGCCGTGT TCTCGGGAAT GATCGGGGTG
ACGGCCTTCG GCCTGTTCCT GACGCCCGTG TTCTACGTGC TGATGCGCCG CCTGGCAGGC
AACCGGCCGC TCAAGCAGCA TGGTCCCGAG ATGGAGCAAG AGGCCCCTGC ACACGCACCC
GCCCACGGCC ATGCCTTGGG TGGCGGCGCG CTGCCCATGC CCTCTGCTGC GCGTGGCGAG
CATGAATGA
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| Protein sequence | MPPDRRRHGP RFAVAEPNTM NLSKFFIDRP IFAGVLSLLM LIAGLIAMGG LPISEYPEVA
PPSVVVRAQY PGANPKVIAE TVATPLEEQI NGVEGMLYMG SQATSDGVMT LTVTFRLGTD
PDKAQQMVQN RVSQAEPRLP EEVRRLGITT VKSAPDLTMV VHLVSPNQRY DINYLRNYAV
LNVKDPLARI EGVGQIQIFG GGDYAMRVWL DPQKVAQRGL SASDVVAAIR GQNVQAAAGV
VGASPGLPGV DMQLSINAQG RLQSEEDFGD IIVKSGADGA VTRLRDIGRL EMGAADYSLR
SLLNNDPAVG MGVFQAPGSN ALEISANVRK TMEALNKNMP EGLEYRIAYD PTQFVRASIE
SVVHTLLEAI VLVVLVVILF LQTWRASIIP LLAVPVSVIG TFAVLHLLGF SINALSLFGL
VLAIGIVVDD AIVVVENVER NIEAGLTPRN ATYRAMREVS GPIIAIALVL VAVFVPLAFI
SGLTGQFYKQ FAVTIAISTV ISAINSLTLS PALAALLLRG HDAPKDALTR GMDRAFGWLF
RGFNRMFHRG SEAYSGGVGR VISRKALMLA IYLALIAVTF GLFKAVPSGF VPAQDKQYLI
GFAQLPDGAT LDRTDEVIRR MGEIMKDNPN VEDTIAFPGL SINGFTNSSN SGIVFATLKP
FDERKRADQS GGAVAGQLNQ AFAGIQDAFI VMFPPPPVAG LGTTGGFKLQ LEDRASLGYD
QMDAAVKAFM AKAYQTPELT GMFTSWQVNV PQLYADIDRT KARQLGVPVT DIFDTMQIYL
GSLYANDFNK FGRTYSVRVQ ADAPYRARAE DVGMLKVRSS SGEMIPLSAL MKVDSSFGPE
RAMRYNGYLT ADINGGAAPG FSSGQAQDAI KRIAAETLPK GIDFEWTDLT YQEILAGNSA
VIVFPLALLL VFLVLAAQYE SLTLPIAIIL IVPMGLLAAM TGVWLSGGDS NVFTQIGLIV
LVGLSAKNAI LIVEFARELE FEGRTPIQAA IEASRLRLRP ILMTSLAFVM GVLPLVLSTG
AGSEMRRAMG VAVFSGMIGV TAFGLFLTPV FYVLMRRLAG NRPLKQHGPE MEQEAPAHAP
AHGHALGGGA LPMPSAARGE HE
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