| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5114 |
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| Symbol | |
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| ID | 5750725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5664743 |
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| End bp | 5666137 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641300238 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001566128 |
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| Protein GI | 160900546 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.488167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCCGA CTCCGCAATC GGACTTGTCC CAGCAGACAC TGCCTGTCGG CATATTTATT
CAGAACATTC CTACAATCAG ATCTGCTGCT TACCGTGCCT CTTCGACCGA ACACTCCATG
ACCGAATTGC CTGTCCATCT CTTCAACGAT GCCCCTGCGG CCAGCCCCGC GTCCACAGAC
CGGGGAATGA TCGCGCGCCA GGCCATCGTC AACGGGGTGC AGCAGATCAT CGGCTATGAG
CTTTTCAACC GTTCGCGCGC CTACCCGGAC CATACGGCGG CCTCGGACGT GTCCCTGGTA
TTCACGGCCC TGTCGCATGC CGGCGAAGAG GACCTGGTCG GCACCAAGTT GATGTTCGTC
AACTGCACGC ATGAAAGCCT GGCCGGCGGA CATCTGGAGC TGCTCAACCC CGACAAGGTG
GTGCTGGAGA TCCCGCCGCT GGGCCTGGCC GCACAACAAG AGGTGCAGGC CCGCCTGCCC
ATCCTCAGCA ATCTGCGCGC GCGCGGCTTC AACCTGGCCT TCAATCACAC GGTGCTGGAG
TCCGCCTATG CGGCCTGGCT GCCCCTGGCC GACTACATCA AGTTCGACCT GTCCGTGCTG
GCCCCTGACC AGTTGGCCGT GCTGGTCAAC TTCGCTGGCC GCCACACGCG CGCCGAGCTG
ATCGCCGAGA AGGTGGAAAG CGCCCAGCAG CATGAGCAGG TGGGCCGCCT GGGCATACAG
CTGTTCCAGG GCTTCTGGTT TGCGCGGCCC ACGGTGGTGC GCACCAAGCT GCTGTCGCCC
TCGCAGCAAA GCATCGTCCA GCTGCTGAAT CTGGTGCGCC AGCAGGCCAG CACCGATGCC
ATCGAGGATG TGCTCAAGAA GGATGCAGGC CTGGCCTTCA ACCTGATGCG CCTGATCAAT
TCCGTGGGTT TTGGCGTGCA ACGCGAGATC ACCTCCTTCC GCCAGGCCGT GATGCTCATG
GGCCTCAAGA AGCTGTTCCG CTGGGCGGCC ATGCTGCTGA CCGCATCGCG CAACGGCGGC
CCGCCGCCGG CCATCGGCCA GACCGCCGTG ATCCGCGGGC GGCTGATGGA GCTGCTGGCC
CAGGAATCGC TGAGCGAGGA AGACTCCGAC CAGGCCTTCG TCGTCGGCAT CTTCTCGCTG
CTGGGCAGCA TGCTGGACCT GCCGCAGGAC GTGGCCATGA GCCTGATCCC CGTGCCCGAT
GCCGTCTCCG CCGCCGTGCT GCGCCATGAA GGCGTGCTGG GCGAGCTGCT GATCCTGGCC
CAGGCCTGCG AAGCCAGCGA CGACGCAGCC TTCAACCGCA GCGCAGACGC ACTGCGCCTG
AGCAGCCAAC AGATCAACTG GGCCCATCTG CAGGCCCTGG CCTGGACCGA TCAACTGGCA
GACAGCTCGC TATAG
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| Protein sequence | MGPTPQSDLS QQTLPVGIFI QNIPTIRSAA YRASSTEHSM TELPVHLFND APAASPASTD
RGMIARQAIV NGVQQIIGYE LFNRSRAYPD HTAASDVSLV FTALSHAGEE DLVGTKLMFV
NCTHESLAGG HLELLNPDKV VLEIPPLGLA AQQEVQARLP ILSNLRARGF NLAFNHTVLE
SAYAAWLPLA DYIKFDLSVL APDQLAVLVN FAGRHTRAEL IAEKVESAQQ HEQVGRLGIQ
LFQGFWFARP TVVRTKLLSP SQQSIVQLLN LVRQQASTDA IEDVLKKDAG LAFNLMRLIN
SVGFGVQREI TSFRQAVMLM GLKKLFRWAA MLLTASRNGG PPPAIGQTAV IRGRLMELLA
QESLSEEDSD QAFVVGIFSL LGSMLDLPQD VAMSLIPVPD AVSAAVLRHE GVLGELLILA
QACEASDDAA FNRSADALRL SSQQINWAHL QALAWTDQLA DSSL
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