Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5049 |
Symbol | |
ID | 5750660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5593728 |
End bp | 5595038 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641300173 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_001566063 |
Protein GI | 160900481 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.96187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.62875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCG CCACCGCCTC TTCCCCGAAC CAGCAACTCC AGAACCGGCG CAACGCCGCC ATGCCGCGCG GCGTGGGCGT GATGTGCGGC TTCCATGCCG TGCAGGCCGA CAATGCCCTG CTGACCGATG CCGAGGGCCG GCAGTACATC GATTTCGCGG CCGGCATTGC CGTGCTCAAC ACGGGCCACC GCCATCCGCG CGTGGTCCAG GCCGTGCAGC AGCAACTGGA GCGCTTCACG CACACGGCCT TCCAGATCGT TCCCTACGAA AGCGCGATTG CGCTGGCCGA GCGCATCAAT GCGCTGGCGC CCATCGCCGG CCCGGCCAAG ACCGCCTTCT TCACCACGGG CGCCGAGGCC GTGGAGAACG CCGTCAAGAT CGCGCGCCAT GCCACGGGCC GCTCGGCCGT GATCGCCTTC CAGGGCGCCT TCCATGGCCG CACCCAGCTG GGCATGGCAC TGACGGGCAA GGTGGCGCCC TACAAGCAGG GCTTCGGCCC CATGCTGGGC GAAGTCTTCC ACGCGCCCTT CCCCGGCGAG CAGGCGGGCG TGAGCGTGCA GCAGTCGCTG GACGCCATTG CCATGCTGCT CAAGACCTCG GTGGACCCGC AGCGCGTGGC CGCCATCATC GTGGAGCCCG TCCAGGGCGA AGGGGGCTTT CACCCCGTGC CTGCCGCCCT GTTCACCGGC CTGCGCCAGC TGTGCGACCA GCACGGCATG CTGCTGATCG CCGACGAGGT GCAGACCGGC TTCGCTCGCA CGGGCAAGCT GTTCGCCATG GAGCACTACG GCGTGCAGCC CGACCTGATC ACCATGGCCA AGAGCCTGGG CGGCGGCCTG CCGATCTCGG GCGTGGTGGG CCGCGCGGCC GTCATGGACG CACCCCACCC CGGCGGCCTG GGCGGCACCT ATGCCGCCAA CCCGCTGGCC GTGGCCGCGG CCCATGCCGT GCTCGACGTG ATCGATGAAG AACGGCTGTG CGAGCGCGCC CACGCGCTGG GCAACCAGCT GCGCGCGCGC CTGCAAGCCC TGCAGGCGCA GGATGCCGGC ATTGCCGACG TGCGCGGCCT GGGCTCGATG CTGGCCGTGG AGTTCCGCCT TCCCGGCAGC GGCGAGCCCG ACGCGCAGCG CGTGGCCGCC GTCGTCCGGC ACGCGCAGGA GCAGGGCCTG CTGCTGCTGA CCTGCGGCCT GTACGGCAAC GCCATCCGCT TTCTCTATCC GCTGACGATT CCACAGCCGC TGTTCGCCAG GGCCCTGGAC ATCATCGACA GCGCCATCAC CCAGAGCGCG TCCCAGCCAG TCGCCGCCTG A
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Protein sequence | MSSATASSPN QQLQNRRNAA MPRGVGVMCG FHAVQADNAL LTDAEGRQYI DFAAGIAVLN TGHRHPRVVQ AVQQQLERFT HTAFQIVPYE SAIALAERIN ALAPIAGPAK TAFFTTGAEA VENAVKIARH ATGRSAVIAF QGAFHGRTQL GMALTGKVAP YKQGFGPMLG EVFHAPFPGE QAGVSVQQSL DAIAMLLKTS VDPQRVAAII VEPVQGEGGF HPVPAALFTG LRQLCDQHGM LLIADEVQTG FARTGKLFAM EHYGVQPDLI TMAKSLGGGL PISGVVGRAA VMDAPHPGGL GGTYAANPLA VAAAHAVLDV IDEERLCERA HALGNQLRAR LQALQAQDAG IADVRGLGSM LAVEFRLPGS GEPDAQRVAA VVRHAQEQGL LLLTCGLYGN AIRFLYPLTI PQPLFARALD IIDSAITQSA SQPVAA
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