Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5044 |
Symbol | |
ID | 5750655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5586093 |
End bp | 5588126 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641300168 |
Product | DNA primase |
Protein accession | YP_001566058 |
Protein GI | 160900476 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.764772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.79995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCGC GAAGGCACAA TACGCGGGTG TCCATTCCCC AATCGTTCAT CCAGGAATTG CTCTCGCGCG TCGACGTGGT CGATATCGTG GGACGCTACG TGCAGCTCAG GAAGGGCGGC GCCAACTTCA TGGGCCTGTG CCCGTTCCAC AGCGAGAAGT CGCCGTCCTT CACCGTCAGT CCCAGCAAGC AGTTCTATCA CTGCTTTGGC TGCGGCAAGA ATGGCAACGC CATCGGCTTT CTGATGGACC ATGCCGGCAT GGGCTTCGTC GAAGCCGTGC AGGATCTTGC CAGCCAGGTC GGCCTGCAGG TGCCGCAGGA CGACATCAGC CCCGCCGAGC GCGAGCGCCA GGCCGCGCAA AAGCAGAAAC AGGCCACCCT CACCGACGTG CTGGAGAAGG CAGGCGACGC CTACCGCAAG CACCTCAAGG CATCGCCCCA GGCCATCGAC TACCTCAAGC GCCGCGGCGT CTCGGGCGAG ACCGCCAAGC GCTTCGGCCT GGGCTACGCG CCTGCGGGCT GGCGGTCGCT GGCCAGCGTG TTCCCGCAGT ACGACGATCC GCAGCTCGAA GAATCGGGCT TGGTCATCGT TGGCGAGGGC GACGACAAGC GCTACGACCG CTTCCGCGAC CGGCTGATGT TTCCCATCCG CAACGTCAAG GGCGAGTGCA TCGGCTTCGG CGGCCGCGTC TTCGGCGACG AGAAGCCCAA ATACCTGAAT TCGCCCGAAA CCCCGGTCTT TCACAAGGGG CGCGAGCTCT ACGGCCTCTT CGAGGCCCGC ACCGCCCTGC GCGACATGGG CTATGCGCTG GTCACCGAAG GCTATATGGA CGTGGTGGCC CTGGCCCAGC TGGGCTTTGC CAACGCCGTC GCCACGCTGG GCACCGCCTG CACGCCCGAC CATATTCACA AACTGTTTCG ATTTACCGAA GCCGTCGTCT TCAGCTTCGA CGGCGATGCG GCGGGACGGC GCGCCGCGCG CAAGGCGCTT GATGCCGCCC TGCCCTATGC CAGCGACACG CGCAGCGTCA AATTCCTCTT CCTGCCCGCC GAGCACGACC CGGACAGCTT CATCCGCGAG TACGGCAGCG AAGCCTTTGC CCGCTACGTG GGCGACGCGC TGCCGCTGAG CCGCTTTCTC ATCGAGGCGG CCAGCGAAGG CTGCGACCTG GGCCAGGCCG AAGGCCGCGC CCACATGGCC AGCAATGCCC GCCCGCTGTG GACGGCCCTG CCCGACGGCG CCCTCAAGCG CCAGCTGCTG GGCGAGATCG CCGAACTCGT GCAGCTGGAT GCGCGCGATC TCTCGGACCT GTGGTCGCAG GAAGCCGCCC GCAGCGGCCC GGCACGGGGC TCCATGGCCG GCGGCGCCCC CCATCCAGGC CAGGCCAGCC ATGCACCGGC CGCGCCCGAC TGGGGCCAGC CTGTCGAATA CGGCGCGCCT TCGGGCTGGC ACGAGCGTGG CGGCCATGGC GGCGGCGCGG GCGGCTGGCG CAGCGGCGAG CCCGGGCGCG GCGGCAAAAA GCCCTGGCCG CGCAAGCCCT GGGACAAGAA TGGCCGGGCC GATTTCAACC CGCCCCCCAT GGGCCCGCGT GGCGCGCCAG CCACACGCAC CGACCAGGCG GCACGCCTGC TCATGGCGCA CATGGAATTC ATGGAAGAAC TCACCCATGA GGACTTCGAG GCACTGGCGC ACTGCTCAGG CGAACATGGC GCCATGTTCC GCTGGATGGA GGCACAGTTC CAGGAATCCG GGGCCCGGCC CTTTGCCGTG CTGCGCGAGC AACTGCGCGG CCTGCCTCAC GAAACGCTGG CAGACAGGCT CATGAGCGGC CCCCATGCGC ATCCCGAGGG CGAACTGCCC GAGCTGCGCC GTGAGTTGCG TGATGTCCTC AATCGCATGG TCATCGTCCA CATCAAGGCC CAGATCGACG AAGCCTTGCG CGACATGGCG CGGGACCCCA GCGCCGCCCA GCGCTATCGC GATCTCTTTG CCCGACAGCA GGCCCTGGAA AACCAGATGC GCACTTCCTC TTGA
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Protein sequence | MAPRRHNTRV SIPQSFIQEL LSRVDVVDIV GRYVQLRKGG ANFMGLCPFH SEKSPSFTVS PSKQFYHCFG CGKNGNAIGF LMDHAGMGFV EAVQDLASQV GLQVPQDDIS PAERERQAAQ KQKQATLTDV LEKAGDAYRK HLKASPQAID YLKRRGVSGE TAKRFGLGYA PAGWRSLASV FPQYDDPQLE ESGLVIVGEG DDKRYDRFRD RLMFPIRNVK GECIGFGGRV FGDEKPKYLN SPETPVFHKG RELYGLFEAR TALRDMGYAL VTEGYMDVVA LAQLGFANAV ATLGTACTPD HIHKLFRFTE AVVFSFDGDA AGRRAARKAL DAALPYASDT RSVKFLFLPA EHDPDSFIRE YGSEAFARYV GDALPLSRFL IEAASEGCDL GQAEGRAHMA SNARPLWTAL PDGALKRQLL GEIAELVQLD ARDLSDLWSQ EAARSGPARG SMAGGAPHPG QASHAPAAPD WGQPVEYGAP SGWHERGGHG GGAGGWRSGE PGRGGKKPWP RKPWDKNGRA DFNPPPMGPR GAPATRTDQA ARLLMAHMEF MEELTHEDFE ALAHCSGEHG AMFRWMEAQF QESGARPFAV LREQLRGLPH ETLADRLMSG PHAHPEGELP ELRRELRDVL NRMVIVHIKA QIDEALRDMA RDPSAAQRYR DLFARQQALE NQMRTSS
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