Gene Daci_4994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4994 
Symbol 
ID5750605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5528909 
End bp5529652 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content68% 
IMG OID641300118 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001566008 
Protein GI160900426 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.103725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAACGA GTACCCACGA GCCCATGCTC ACCCCCGCCG AGCGCGAGGC CATCAATTCC 
GGCCAGTGGT TCTGCAGCCT TTCGCCCTCG CTGCGCCATG ACATCCTGCG CCAGACCACG
GTCCGGCGGC TCAAGGACGG GGCACTGATC TATGCACGCG GCGATGTGCC GCACAGGTGG
TATGCCTGTG CGCAGGGCGC CGTGCGCATG AGCTCGACCA GCCTGTCGGG TCGGCAGACC
ACGCTGGCCT ATGTGGAGCC GGGCGCCTGG TTCGGTGCCA TGTCCACCTT TCTTGACGAG
CCTCGCACGC GCGATGCCTA TGCCCACGGC GACACCACGC TGCTGTGCGT GGACAAGGAG
AGCTTTCACG CCATCCTGGC CACGCACGTG GAGTTCTACG ACGCCCTGCT GCGCCTGCAG
GCCCACCGCA TACGCCAGAC CTACGGGCTG GTGGAAGACC TCAACACCCT GCCGCTGCGC
GCACGCCTGG CCAAGCAGTT GCTGCACCTG TCGCGCAGCT ACGGCACACA GGTGCTGGAC
GACCCGCGCG AGCTGCGCAT AGGCCTGCAA CTGGTGCAGG AGGAGCTGGC CCAGTTGCTG
GGCGCCTCGC GCCAGCGCGT GAACCAGGAG CTCAAGCGCA TGGAGCGCGA CGCCTGCATT
CGCGTGGAAG CCCAGGGTCT GGTGGTGAGG GACCTGGTGG CCCTGCAGAC CATCGTGCGC
GAGGCCAGCC TGGCCGGCGC CTGA
 
Protein sequence
MQTSTHEPML TPAEREAINS GQWFCSLSPS LRHDILRQTT VRRLKDGALI YARGDVPHRW 
YACAQGAVRM SSTSLSGRQT TLAYVEPGAW FGAMSTFLDE PRTRDAYAHG DTTLLCVDKE
SFHAILATHV EFYDALLRLQ AHRIRQTYGL VEDLNTLPLR ARLAKQLLHL SRSYGTQVLD
DPRELRIGLQ LVQEELAQLL GASRQRVNQE LKRMERDACI RVEAQGLVVR DLVALQTIVR
EASLAGA