| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4931 |
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| Symbol | |
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| ID | 5750538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5450238 |
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| End bp | 5453396 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641300051 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001565945 |
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| Protein GI | 160900363 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.324611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGCCT GCAAGGCGTT GCGCGAAGAG GGCTACAAGG TCATCCTGAT CAACAGCAAC
CCTGCCACGA TCATGACCGA CCCGGCCACG GCCGACGTCA CCTACATCGA GCCCATCACC
TGGCAGACGG TCGAGAAGAT CATCGCCAAG GAGCGTCCCG ACGCCATCCT GCCGACCATG
GGCGGCCAGA CCGCGCTGAA CTGCGCGCTG GACCTGTGGC GCAACGGCGT GCTGCACAAG
TACAAGGTCG AGCTGATCGG CGCAACTCCC GAGGCCATCG ACAAGGCCGA GGACCGCCTC
AAGTTCAAGG ATGCGATGAC GCGCATCGGC CTGGGTTCGG CACGCTCGGG CATCGCCCAT
TCGATGGACG AAGCCTGGGC CGTGCAAAAG GAAATGGGCT TTCCCACCGT CATCCGCCCC
AGCTTCACGC TGGGCGGCAC GGGCGGCGGC ATTGCCTACA ACCCCGAAGA GTTCGAGACC
ATCTGCAAGC GCGGCCTGGA AGCGTCCCCG ACCAATGAGC TGCTGATCGA GGAATCGCTG
CTCGGCTGGA AGGAGTACGA GATGGAAGTC GTCCGCGACA AGGCGGACAA CTGCATCATC
ATCTGCTCCA TCGAGAACCT GGACCCCATG GGCGTGCACA CCGGCGACTC GATCACCGTG
GCACCCGCGC AGACGCTGAC CGACAAGGAA TACCAGATCA TGCGCAACGC CTCGCTGGCG
GTGCTGCGCG AGATCGGTGT GGACACGGGC GGCTCCAACG TGCAGTTCTC GGTGAATCCG
AAGGACGGCC GCATGATCGT CATCGAGATG AACCCGCGCG TGTCGCGTTC CTCGGCGCTG
GCCTCCAAGG CCACGGGCTT CCCCATCGCC AAGGTCGCTG CCAAGCTGGC CGTGGGCTAC
ACGCTGGACG AACTCAAGAA CGACATCACG GGCGGCAAGA CGCCCGCTTC GTTCGAACCC
TCGATCGACT ACGTGGTCAC CAAGATCCCG CGTTTCGCGT TCGAGAAGTT CCCCGCTGCC
GACAACCGCC TGACCACGCA GATGAAGTCC GTGGGCGAGG TCATGGCCAT TGGCCGTACC
TTCCAGGAGT CCTTCCAGAA GGCGCTGCGC GGCCTGGAAG TCGGCGTGGA CGGCATGAAC
GAAAAGACCC AGGACCGCGA AATCCTCGAA AAGGAACTCG GCGAGCCAGG TCCGGACCGC
ATCTGGTATG TGGGCGATGC CTTCGCTGCC GGCTGGACGC TGGACGAGGT GCACAACATC
ACCAAGATCG ACAAGTGGTT CCTCGTGCAG ATCGAAGAGA TCGTGAAGAT CGAACTCGAA
CTGGACCAGG TCTACGAGGA AAAGGGTGAT GCCGCGCTGG CCGCACTGGA CGCCACCACG
CTGCGCACGC TCAAGCAAAA GGGCTTCTCC GACCGTCGCC TGGCCAAGCT GCTGCACAGC
AATGAAAAGG CCGTGCGCGA GGCACGCAAG GCACTGGGCG TGCGTCCCGT GTTCAAGCGT
GTGGATACCT GCGCTGCCGA GTTCGCCACC GACACGGCCT ACATGTACTC CACCTATGAC
GAGGAGTGCG AAGCCGAGCC GACGGACAAG AAAAAGATCA TGGTGCTGGG CGGTGGCCCG
AACCGCATCG GCCAGGGCAT CGAGTTCGAC TACTGCTGCG TGCATGCTGC GCTCGCCATG
CGCGAGGACG GCTATGAAAC CATCATGGTC AACTGCAACC CCGAGACCGT GTCCACCGAC
TACGACACGT CGGACCGCCT GTACTTCGAG CCGCTGACGC TGGAAGACGT GCTCGAAGTC
GTGGCTGTCG AGAAGCCTGT TGGCGTCATC GTGCAGTACG GCGGCCAGAC GCCCCTGAAG
CTTGCGCTGG GTCTTGAAAA GGAAGGCGTG CCCATCATCG GCACCACGCC CGACATGATC
GACGCGGCCG AAGACCGCGA GCGCTTCCAG AAGCTGCTGC ATGAGCTGGG CCTGCGCCAG
CCGCCTAATG CCACGGCCCG TACCGAGCCC GAAGCGCTGG AAAAGGCGGC CGGCCTGGGC
TACCCCCTGG TCGTGCGTCC CAGCTATGTG CTGGGTGGCC GTGCCATGGA AATCGTGCAC
GAGCAGCGCG ACCTGGAGCG CTACATGCGC GAAGCCGTCA AGGTCAGCAA CGACTCGCCC
GTGCTGCTGG ACCACTTCCT GTCCAACGCC ATCGAGTGCG ATGTGGACTG CGTGCGCGAC
CGCGAAGGCG CCGTCTTCAT CGGCGGCGTG ATGGAGCACA TCGAGCAGGC TGGCGTGCAT
TCGGGCGATT CCGCCTGCTC GCTGCCGCCT TACTACCTCA AGCCCGAGAC CGTGGCCGAG
ATCAAGCGCC AGACTGCCGC CATGGCCAAC GCGCTGAGCG TGGTCGGCCT GATGAACGTG
CAGTTCGCCA TCAAGGAAAC GGCCGACGGC GACGTGATCT ACGTGCTGGA AGTCAACCCG
CGTGCCTCGC GCACCGTGCC CTTCGTCTCC AAGGCCACCG GCATCCAACT GGCCAAGGTG
GCTGCGCGCT GCATGGCCGG CGACACGCTG GCCCAGCAGG GCATCACCAA GGAAGTCACG
CCGCCGTACT TCAGCGTCAA GGAAGCCGTC TTCCCGTTCG TGAAGTTCCC TGGCGTGGAC
ACCATCCTCG GCCCCGAGAT GAAGTCCACC GGCGAAGTCA TGGGCGTGGG CAAGACCTTT
GGCGAAGCCT TCGTCAAGAG CCAACTGGGC GCCGGCGTCA CGCTGCCGAC CCAGGGCAAG
GTCTTCCTGA CCGTGAAGAA CGCCGACAAG CCGCGTGCCG TGGCCGTGGC CAAGGAACTG
GCTGCGATGG GCTTCGTGCT GTGCGCCACG CGCGGCACGG CAGCGGCCAT CTCCGAGGCC
GGCATCGAGG TGCAGCTCGT CAACAAGGTG ACCGAAGGCC GCCCCCACAT CGTGGACATG
ATCAAGAACG GCGAGATCGC CATGGTCATC AACACGGTGG AGGAGCGCCG CAATGCCATC
GCCGACTCGC GTGCCATCCG TACCAGCGCC CTCCTGGCGC GTGTGACCAC CTTCACGACC
ATCTTCGGTG CAGAAGCTGC CGTCGAGGGC ATGAAGTCCA TGGGCAACAT GGACGTGCAC
TCGGTCCAGG AATTGCACGC CCAACTGCAG GCTGCCTGA
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| Protein sequence | MQACKALREE GYKVILINSN PATIMTDPAT ADVTYIEPIT WQTVEKIIAK ERPDAILPTM
GGQTALNCAL DLWRNGVLHK YKVELIGATP EAIDKAEDRL KFKDAMTRIG LGSARSGIAH
SMDEAWAVQK EMGFPTVIRP SFTLGGTGGG IAYNPEEFET ICKRGLEASP TNELLIEESL
LGWKEYEMEV VRDKADNCII ICSIENLDPM GVHTGDSITV APAQTLTDKE YQIMRNASLA
VLREIGVDTG GSNVQFSVNP KDGRMIVIEM NPRVSRSSAL ASKATGFPIA KVAAKLAVGY
TLDELKNDIT GGKTPASFEP SIDYVVTKIP RFAFEKFPAA DNRLTTQMKS VGEVMAIGRT
FQESFQKALR GLEVGVDGMN EKTQDREILE KELGEPGPDR IWYVGDAFAA GWTLDEVHNI
TKIDKWFLVQ IEEIVKIELE LDQVYEEKGD AALAALDATT LRTLKQKGFS DRRLAKLLHS
NEKAVREARK ALGVRPVFKR VDTCAAEFAT DTAYMYSTYD EECEAEPTDK KKIMVLGGGP
NRIGQGIEFD YCCVHAALAM REDGYETIMV NCNPETVSTD YDTSDRLYFE PLTLEDVLEV
VAVEKPVGVI VQYGGQTPLK LALGLEKEGV PIIGTTPDMI DAAEDRERFQ KLLHELGLRQ
PPNATARTEP EALEKAAGLG YPLVVRPSYV LGGRAMEIVH EQRDLERYMR EAVKVSNDSP
VLLDHFLSNA IECDVDCVRD REGAVFIGGV MEHIEQAGVH SGDSACSLPP YYLKPETVAE
IKRQTAAMAN ALSVVGLMNV QFAIKETADG DVIYVLEVNP RASRTVPFVS KATGIQLAKV
AARCMAGDTL AQQGITKEVT PPYFSVKEAV FPFVKFPGVD TILGPEMKST GEVMGVGKTF
GEAFVKSQLG AGVTLPTQGK VFLTVKNADK PRAVAVAKEL AAMGFVLCAT RGTAAAISEA
GIEVQLVNKV TEGRPHIVDM IKNGEIAMVI NTVEERRNAI ADSRAIRTSA LLARVTTFTT
IFGAEAAVEG MKSMGNMDVH SVQELHAQLQ AA
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