Gene Daci_4930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4930 
Symbol 
ID5750537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5449507 
End bp5449983 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID641300050 
Producttranscription elongation factor GreA 
Protein accessionYP_001565944 
Protein GI160900362 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB
[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.41417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA TTCCCATCAC CAAGCGCGGA GCCGAGAAGC TCAAGGACGA ACTGCACCGC 
CTGAAAACCG TGGAGCGTCC CTCCATCATC CAGGCCATTG CCGAGGCACG TGCCCAGGGC
GACCTGAGCG AAAACGCCGA ATACGAGGCC GCCAAGGACC GCCAGGGCTT CATCGAAGGC
CGCATTGCCG AGGTCGAGAG CAAGCTGTCG GCTGCCCAGA TCATCGATCC CTCTTCCGTG
GATGCCGGTG GCCGCGTGGT CTTCGGTGCA ACGGTGGAGC TCGAGGATGA AGACAGCGGC
GACACGGTCA AGTACCAGAT CGTCGGCGAG GACGAGGCCG ACCTCAAGCT GGGCCTGATC
AACGTCTCCA GCCCCATCGC GCGCGCGCTG ATCGGCAAGG AAGAGGGCGA TACCGCCGTC
GTGCAGGCAC CGGGCGGCGA GCGCCGCTAT GAAGTGGTGT CGGTGCGCTA CCTCTGA
 
Protein sequence
MATIPITKRG AEKLKDELHR LKTVERPSII QAIAEARAQG DLSENAEYEA AKDRQGFIEG 
RIAEVESKLS AAQIIDPSSV DAGGRVVFGA TVELEDEDSG DTVKYQIVGE DEADLKLGLI
NVSSPIARAL IGKEEGDTAV VQAPGGERRY EVVSVRYL