Gene Daci_4873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4873 
Symbol 
ID5750479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5385276 
End bp5385869 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content66% 
IMG OID641299992 
Producthypothetical protein 
Protein accessionYP_001565887 
Protein GI160900305 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC CCACGTTTTC CATTTGTGTG TATTGCGGCT CGCGCCCCGG CGACCAGCCC 
GGATTCATCG AGGCGGCCCG CGCCACCGGC CGCTGGATCG GTGAGCACGG CGGCCAGCTG
GTCTATGGAG GCGGCCGCAG CGGCCTGATG GGCGAGGTGG CCGAGGCCAC GCGGCAGGCC
GGCGGCCGCG TCGTGGGCGT GATTCCGCAG GCGCTGGTGG ACAAGGAACT GGCCAACCAT
GCCTGCGATG AGCTGCACAT CGTCCAGACC ATGCACGAGC GCAAGGCCAT GATGGCCGAG
CGCAGCGATG CCTTCGTCGC CCTGCCCGGC GGCATAGGCA CCTTCGAGGA ATTGTTCGAG
GTCTGGACCT GGCGCCAGTT GCGCTACCAC GACAAGCCCA TCGGCCTGCT CAATGTGGAT
GGCTACTACG ACAGCATGCT GCAGTTCCTG CAGACCTGCG TGGGCCATGG CTTCATGGGC
GAGTGGCAGA TGGGACTGAT CGAAAGCGGC AGCGACATCC CCACGCTGCT GCAATCCCTG
GTGCAGAACG CCGGCACGGG CCTGGAGACT GCGCCCTTGC GCGCCGTGAT CTGA
 
Protein sequence
MTNPTFSICV YCGSRPGDQP GFIEAARATG RWIGEHGGQL VYGGGRSGLM GEVAEATRQA 
GGRVVGVIPQ ALVDKELANH ACDELHIVQT MHERKAMMAE RSDAFVALPG GIGTFEELFE
VWTWRQLRYH DKPIGLLNVD GYYDSMLQFL QTCVGHGFMG EWQMGLIESG SDIPTLLQSL
VQNAGTGLET APLRAVI