Gene Daci_4852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4852 
Symbol 
ID5750455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5362515 
End bp5363330 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID641299968 
Productmethionine aminopeptidase, type I 
Protein accessionYP_001565866 
Protein GI160900284 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.838238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA CCATCAAGAG CGCTGAAGAC ATCGCAGCCA TGCGCGTGGC CTGCCGCCTG 
GCTTCGGAAG TGCTGGACTA CATCACCCCC CACATCAAGC CCGGCATCAC CACGGCCGAG
ATCGACCGCC TGGGCGCCGA ATGCATGGCG CAGCAGGGCA CGGTTTCCGC CACCATCGGC
TACCAGCCGC CCGGCTACCC TCCCTACCCC GGACACTTGT GCACCTCGGT CAACCATGTG
GTCTGCCACG GCATTCCCAA TGACAAGCCG CTCAAGAAGG GCGACATCGT CAATGTGGAC
GTCACGGTCA TCACCAAGGA CGGCTGGTAC GGCGACAACA GCCGCATGTT CATGATCGGA
GAGTGCTCCA TCGCGGCCAA GCGCCTGTCG GCACTGACCT TCGACGCCAT GTGGCTGGGC
ATCCAGCAGG TCAGGCCCGG CGCCACGCTG GGCGACATCG GCAACGCCAT CCAGACCTTT
GCCGAAGGCC ACGGCCTGTC GGTGGTGCGC GAGTTCTGCG GCCACGGCAT CGGCCAGAAG
TTCCACGAAG AGCCCCAGAT CCTGCACTAC GGCCGCCCCG GAACGGGCAC CGTGCTGGAA
GAAGGCATGG TCTTCACCGT CGAGCCCATG CTCAACCTGG GCAAGCGCGA GATCAAGGAA
CTGGGCAAGG ACGGCTGGAC CATCGTGACC AAGGACCACA GCCTCTCGGC CCAGTGGGAA
CACACCCTGG TGGTGACCAG GACCGGCTAC GAAGTCATGA CCCTGTCGGC CGGCTCGCCC
GCGCTGCCCC CCTTTGTTAC CACCACGAGC TGCTGA
 
Protein sequence
MSITIKSAED IAAMRVACRL ASEVLDYITP HIKPGITTAE IDRLGAECMA QQGTVSATIG 
YQPPGYPPYP GHLCTSVNHV VCHGIPNDKP LKKGDIVNVD VTVITKDGWY GDNSRMFMIG
ECSIAAKRLS ALTFDAMWLG IQQVRPGATL GDIGNAIQTF AEGHGLSVVR EFCGHGIGQK
FHEEPQILHY GRPGTGTVLE EGMVFTVEPM LNLGKREIKE LGKDGWTIVT KDHSLSAQWE
HTLVVTRTGY EVMTLSAGSP ALPPFVTTTS C