| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4824 |
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| Symbol | |
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| ID | 5750427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5326357 |
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| End bp | 5328012 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641299940 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001565838 |
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| Protein GI | 160900256 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.888846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.874224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT TGCAAGGACT GATGCAGGAC CGCCCGCTCA TGATCTCGTC GCTGATCGAG
CATGCGGCGC GCTTTCATCC GCACACCGAG ATCGTCTCGC GCCTGCCGGA AACCCGGGAC
GGTGGCCTGC ACCGCACCGA CTGGGCCGGC ATGCGCCGCG CCTCCTGCCA GGTGGCCAAC
GCCCTGCAGT CGCTGGGCGT GCAGCCTGGC GAACGCGTGG GCACGCTGGC CTGGAACAGC
TGGCGCCACC TGGCGCTGTA CTTCGGCGTC TCGGGCAGCG GCGCGGTGCT GCACACCATC
AACCCGCGCC TGTTTCCCGA GCAGATCGAA TACATCGCCA ACCATGCCGA GGACCGGGTG
CTGTTCTTCG ACGTGACCTT CGCGCCGCTG GTGGAAAAGC TCGCACCGCA TCTGAAGACC
GTCACCACCT ATGTCTGCAT GAGTTCGCGC GAGCACATGC CCGCGCTGGA CCTGCCCGAC
CTGCACTGCT GGGACGAGCT GGTGGGCAAC CAGAGCGAGG ACTTCGACTG GCCCGAGTTC
GACGAGCGCA CGGCCTCCTC GCTGTGCTAC ACCTCGGGCA CCACGGGCCA CCCCAAGGGC
GTGCTGTACT CGCACCGCTC CACCGTGCTG CACACGCTGA TGGAGCTGGC GCCCGACACC
TTCGGCCTGA ACGCGAGCGA GACCGTGATG CTCATCGTGC CCATGTTCCA TGCCAACGCC
TGGGGCACAC CCTATGCGGC GGCCATGGCC GGCGCACGGC TGGTGCTGCC CGGCCCCCAC
CTGGATGGCC AGAGCGTCTA CGAGCTCATG CGCGACGAGA AGGTCACCTT CTCGCAGGGC
GTGCCCACCG TGTGGCTGAT GCTGTTCCAG TACCTGGATG CGCATCCCGA CATCGACCCG
CGCGCGCTGG GCGTCAAGAG CATAGGCATC GGCGGCGCGG CCGTGCCGCG CGCCATGCTG
GAGCGCTTCG AGAACCAGTT CGGCGCCCAG GTCGTGCAGG GCTGGGGCAT GACCGAGACC
AGCCCCATCG GCGTGGTCAG CAAGCTGCTG CCCCGGCACG ACGCGCTGTC GGGCGAGGAA
CTGGTCAAGG TCAAGCTCAA GCAGGGACGC GGCGTCTGGG GCGTGGACCT CAAGATCGTG
GACGACGACG GCAGGCCCCA GCCCTGGGAC GGCCAGGCCC GGGGACACCT GCGCGTGCGC
GGCCCCTGGA TCGCCAGCGG CTACTTCAAG GGCGAAGGCG GCTCGCCCGT CGATGAGGAA
GGCTTCTTCA CCACGGGCGA CGTGGCCACC ATCGATGCCG ACGGATTCCT GCAGCTGGTG
GACCGCGCCA AGGACGTGAT CAAGTCGGGC GGCGAGTGGA TCTCCTCCAT CGACGTGGAG
AACGCCGCCA TGGGCCATCC CGGCGTGGCC GAGGCCGCCA TCATCGGCGT GGCCCATCCC
AAGTGGCAGG AGCGGCCGCT GCTGCTGGTG GTGCCGCGCG CAGGCCACAG CGTCAGCCGC
GAGTCCATGC TCGATTTCCT GTCCACGCGC ATCGCCAAAT GGTGGCTGCC CGACGACGTG
CTGCAGGTGG CCGAGCTGCC GCACACGGCC ACCGGCAAGC TGCTGAAAAC GAAGCTGCGC
GAGCAGTACA AGAACCATCC ACTGCCGACG GCCTGA
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| Protein sequence | MPALQGLMQD RPLMISSLIE HAARFHPHTE IVSRLPETRD GGLHRTDWAG MRRASCQVAN
ALQSLGVQPG ERVGTLAWNS WRHLALYFGV SGSGAVLHTI NPRLFPEQIE YIANHAEDRV
LFFDVTFAPL VEKLAPHLKT VTTYVCMSSR EHMPALDLPD LHCWDELVGN QSEDFDWPEF
DERTASSLCY TSGTTGHPKG VLYSHRSTVL HTLMELAPDT FGLNASETVM LIVPMFHANA
WGTPYAAAMA GARLVLPGPH LDGQSVYELM RDEKVTFSQG VPTVWLMLFQ YLDAHPDIDP
RALGVKSIGI GGAAVPRAML ERFENQFGAQ VVQGWGMTET SPIGVVSKLL PRHDALSGEE
LVKVKLKQGR GVWGVDLKIV DDDGRPQPWD GQARGHLRVR GPWIASGYFK GEGGSPVDEE
GFFTTGDVAT IDADGFLQLV DRAKDVIKSG GEWISSIDVE NAAMGHPGVA EAAIIGVAHP
KWQERPLLLV VPRAGHSVSR ESMLDFLSTR IAKWWLPDDV LQVAELPHTA TGKLLKTKLR
EQYKNHPLPT A
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