Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4823 |
Symbol | |
ID | 5750426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5325009 |
End bp | 5326322 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641299939 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001565837 |
Protein GI | 160900255 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.615465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCGT CGGAATCGAC GATGGGCGCG CGCCGGGCCG GTTCCTACCA TGGACCGGCC ACCACAAGAA AAGCGGGCAC GGCGCCCGCA AGCCAGGAGA CCACCATGCG CAACCCCTTC GCCCGCGGCC CCCGCGCCCT GATCGCCTGC CTGGCGCTGG TCCTGCCGGC CGTCACCCCA GTGCCAGCCC AGGCCCAGAA GAAGTACGAC ACCGGCGCCA GCGACACCGA GATCCGCATC GGCAACTTCG TGCCCTACTC AGGTCCCGTG TCGGCCTATG GAACCATAGG CAAGACCCAT GCGGCCTACT TCGCCAAGAT CAACGCCGAG GGCGGCATCA ACGGCCGCAA GATCACCTAC CTCTCGGCCG ACGACGCCTA CAACCCCGCC CAGAGCGTGG AGCAGACGCG CAAGCTGGTC GAGCGCGACG GCGTGCTGCT GATGTTCGGC GCGCTGGGCA CCTCGCACAA CCAGGCCGTG CATCGCTACA TGAACCAGCG CAAGGTGCCC CAGCTGTTCG TCTCCACGGG CGCCACGCGC TGGGGCGATC CGAAGAACTT CCCCTGGACC ATGGGCTGGC AGCCCACCTA CCAGCTCGAA GGCCGCACCT TCGCCCAGCA CATCCTGGCC ACGCGACCCC AGGCCAAGGT GGCCGTCCTG ATGCAGAACG ACGACTTCGG CAAGGACTAC CTCAAGGGCG TGCTCGACGG CTTTGGCGAG CAGGCCAAGC AGCGCATCGT CGTGCAGCAG ACCTACGAGG TCGGCGACCC CACGGTGGAC AGCCAGATGG TGGCGCTCAA GGGCTCGGGG GCGGACACCT TCATCAACAT CAGCACGCCC AAGTTCGCGG CCCAGTCCAT ACGCAAGGCC GCCGACATCG GCTGGAAGCC CGCGCACTAC CTGGTCAGCG TCTCGCTGTC CATCAGCTCG GTGCTCAAGC CCGCGGGCCT GGACAACGCG CGCGGCGTGA TGACGGCCAG CTACCTGCGC GAGCCCTCGG ACCCCTCCAA CCAGGGCACG CCCGAGCTGG CCGGCTACCT GGCCTTCATG AAGCAGTTCT ACCCGGCCGG CGACCCCAAC GATTCGCTCA ACGTCATCGG CTACTCCCAG GCCCAGACCC TGGTACAGGT GCTCAGGCAG GCCGGCGACG AGCTCACGCG CGCCAACATC ATGAAGCAGG CCGCCAGCCT GAAGATGGAC CTGCCCATGC TCTACCCGGG CATCAGCCTG CAGACCGGTG GGGAGGATTT CTTCCCCATC AAGAAGATGC AGCTCGTGCG CTTCGATGGC AGCCGCTACG CGCCCGTGCA ATGA
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Protein sequence | MHSSESTMGA RRAGSYHGPA TTRKAGTAPA SQETTMRNPF ARGPRALIAC LALVLPAVTP VPAQAQKKYD TGASDTEIRI GNFVPYSGPV SAYGTIGKTH AAYFAKINAE GGINGRKITY LSADDAYNPA QSVEQTRKLV ERDGVLLMFG ALGTSHNQAV HRYMNQRKVP QLFVSTGATR WGDPKNFPWT MGWQPTYQLE GRTFAQHILA TRPQAKVAVL MQNDDFGKDY LKGVLDGFGE QAKQRIVVQQ TYEVGDPTVD SQMVALKGSG ADTFINISTP KFAAQSIRKA ADIGWKPAHY LVSVSLSISS VLKPAGLDNA RGVMTASYLR EPSDPSNQGT PELAGYLAFM KQFYPAGDPN DSLNVIGYSQ AQTLVQVLRQ AGDELTRANI MKQAASLKMD LPMLYPGISL QTGGEDFFPI KKMQLVRFDG SRYAPVQ
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