| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4763 |
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| Symbol | |
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| ID | 5750358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5254966 |
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| End bp | 5258055 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641299871 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001565777 |
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| Protein GI | 160900195 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0261947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.80493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT CCATGATCCG GGCCGCACTG AGCCAGCGAC TCATCGTGAT CGTGCTCTCG
CTGGTGCTGT GCGGCTTTGG CCTGCGCGCC GCCATGAATC TGTCGGTGGA TGCCTTTCCT
GACGTGACCA ACGTCCAGGT TCAGGTCGCT ACCGAGGCGC CAGGCCGCTC GCCCGAGGAA
ATCGAGCGCT TCGTGACCGT GCCGCTGGAA ATCGCCATGA CCGGCATGCC GGGCCTGGTG
GAGATGCGCT CGCTCAACAA GAGCGGCCTG TCCATCATCA CTCTGGTCTT CACCGATACC
ACCGACGTGT ACTTTGCGCG CCAGCTCGTC ACCGAGCGGC TGATGGAGGT CACGCCGCGC
ATGCCCGAAG GCATCATCCC CGTGCTGGGG CCGGTGTCCA CGGGCCTGGG CGAGGTCTAC
CAGTACACGC TGGACCATCC CGACGACGGC AAGCGGGCCC TCACGCCCGA GGAACTGACC
GAGCGCCGCA CCATCCAGGA CTGGGTGGCG CGCCCGCTGC TGCGCTCCAT TCCCGGCGTG
GCCGAAATCA ACTCGCAGGG CGGCTACGTC AAGCAGTACC AGGTGGAGGT TGACCCAGGC
CGGCTGCGCC ACTACGGCCT GTCCGTGCGC CATGTGGTCC AGGCCATCGC CGACAACAAC
GCCAACGCCA GCGGCGGCAT CCTGCCCCAG GTCACCGAGC AGTACCTGAT CCGCGCCGTG
GGCCTGATCC AGTCGCTGGA GGACATCGGC AACATCGTCC TCAAGCAGGA TGGCGGCGTG
CCGGTCTTCG TGCGCGATGT GGCCGAGGTC CAGCTGGGCC AGGAAGTGCG CCAGGGCGCC
ATCATCAAGG GTGGCTACAC CGAAGGCGTC TCCGGCATCG TGCTGATGAT GCGCGGCGGC
AATGCCAAGG AAGTCGTCAC CCGCGTGAAG GAGCGCGTGC AGGAGATCAA CTCCAAGGGC
ATGCTGCCCG GCGGCCTGCA GATCGTTCCC TACTACGACC GTACCGACCT GGTCGACTCG
GCGCTGTGGA CCGTGGGCAA GGTGCTGATC GAGGGCATCC TGCTCGTGGT CGTGGTGCTC
TTCATCTTCC TGGGTGACGT GCGCTCCAGC CTGATCGTGG TGGCCACGCT GATCATCACG
CCGCTGACCA CCTTCATCAT GATGAACCGC TGGGGCATCT CGGCCAACCT CATGTCGCTG
GGAGGGCTGG CGATCGCCAT CGGCCTCATG GTCGATGCCA CCGTGGTGGT GGTGGAGAAC
GTGTTCCACA AGCTCGGCCA GGCCGGCGAC AGCATGGGCG CACGCGTGCG CACCGTGCTC
TCGGCCACCA CCGAGGTGGC CACGCCCACC ATCTTCGGCA TCGCCATCAT CATCCTGGTG
TTCCTGCCGC TGATGACGCT GCAGGGCATC GAGGGCAAGA TGTTCGGCCC GCTGGCGCTG
ACCATCGCGA TCTCGCTGGC GGTCTCGCTG GCCGTGTCGC TGTTCCTGTC GCCCGTGCTG
TGCTCGTACT TCCTCAAGGG CGGCGCGGAC CATGACACGC GCCTGATCGC CTTCCTCAAG
CGCCACTACC TGCGCCTGCT GGACCTGGCC ACCGCACGCA ACCGCGCCAC GCTGGCCGTG
GCCGTGGCGC TGCTGCTGGG CTCGCTGGGA CTGTTCCCGC TGCTGGGCAA GTCCTTCATG
CCCACCATGA AGGAGGGCGC GCTGACGCCG CAGATCAACC GCGTGCCCAG CATCTCGCTG
GACGAGTCCA TCCGCATGGA AATGGCGGCG ATGAAGGCCG TGGCCGAGGT GCCCGGCGTG
CTCAGCGTGG TCTCCAAGCT CGGACGCGGT GAATCGCCGG CCGATCCCGC AGGCCCCAAC
GAGTCCGACC CCATCGTGCT GCTGGACCCC GAGTCCGACC GCACCCAGGA CGAGATCGAC
GAAGACATCC GCCAGCGCCT GTCCTCGATC CCGGGCGTGC AGATCGTGCT GTCCCAGCCG
ATCTCCGAGC GCGTGGATGA AATGGTCACG GGCGTGCGCT CGCAACTGGC CATCAAGGTC
TTCGGCGACG AGCTGGACGA TCTGCGCGAT GTCTCCGAAC AGGTGGCCCG CATCCTCAAG
AGCGTGCCGG GCAGCACGGA CATCCGCGTC GAGCGGCTGT CGGGCCAGCA GGCGCTCACG
GTGGATATCG ACCGCAAGGC CATTGCCCGC CACGGCCTGA ACGTCACCGA CGTGCAGGGC
GTGATCGAGT CGGCCATCGG CGGCAAGGAC GTGACCACGG TCTACGAGGG CGAGCGCCGC
TACAACGTGG TCGTGCGCTT CCCCGAGCCC TTCCGTGGCT CGCCCCAGGC TGTCGGCGCC
ACCTTGCTGA CCACCAGCAC CGGCGCGCAG GTTCCGCTCA ACAGCGTGGC CCGCATCGAA
CTGGTGGACG GACCCGCGCA GATCAGCCGC GAAGGCGGCA AGCGGCGCGT GGTCGTGGGC
GCCAACGTGG AAGGGCGCGA CCTGGGCGGC TTCGTGACCG AAGTGCAGCA GCGCATCGAC
AAGGAAGTGC AACTGCCCGA CGGCTACTAC TTCAAGTACG GCGGCCAGTT CGAGAACATG
GAGCGCGCCA TGGGCACGCT GCAGGTGATC GTGCCGCTGA CCATCGTGGC CATCTTCTTC
CTGCTGTTCG TGCTGTTCAA TTCAGTCAAG CTGGCCGGGC TGATCATCCT GGTGCTGCCT
TTCGCCTCCA TCGGGGGACT GATAGGCCTG TTCGTCACGG GCGAATACGT GAGCGTGCCG
GCATCGGTGG GCTTCATCGC GCTGTGGGGC ATTGCGGTGC TCAACGGCGT GGTGCTGGTC
ACCTGCATCC GCAAGCTGCG CGAGGATGGA ATGGACGTGG CCGAGGCCGT GCGCGAAGGC
TGCGTGCAGC GCTTCCGCCC CGTGATGATG ACGGCCACCG TCGCGCTGCT GGGCCTGGTG
CCCTTCCTGT TCGCCACCGG CCCCGGCTCG GAGGTGCAAC GCCCGCTGGC CATCGTCGTG
ATCGGTGGCC TGATCTCGTC CACCCTGCTC ACGCTGGTGG TGTTGCCGAC CCTGTACCGC
TGGTTTGACG AGAAACCGCT GGAAGCCTGA
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| Protein sequence | MIASMIRAAL SQRLIVIVLS LVLCGFGLRA AMNLSVDAFP DVTNVQVQVA TEAPGRSPEE
IERFVTVPLE IAMTGMPGLV EMRSLNKSGL SIITLVFTDT TDVYFARQLV TERLMEVTPR
MPEGIIPVLG PVSTGLGEVY QYTLDHPDDG KRALTPEELT ERRTIQDWVA RPLLRSIPGV
AEINSQGGYV KQYQVEVDPG RLRHYGLSVR HVVQAIADNN ANASGGILPQ VTEQYLIRAV
GLIQSLEDIG NIVLKQDGGV PVFVRDVAEV QLGQEVRQGA IIKGGYTEGV SGIVLMMRGG
NAKEVVTRVK ERVQEINSKG MLPGGLQIVP YYDRTDLVDS ALWTVGKVLI EGILLVVVVL
FIFLGDVRSS LIVVATLIIT PLTTFIMMNR WGISANLMSL GGLAIAIGLM VDATVVVVEN
VFHKLGQAGD SMGARVRTVL SATTEVATPT IFGIAIIILV FLPLMTLQGI EGKMFGPLAL
TIAISLAVSL AVSLFLSPVL CSYFLKGGAD HDTRLIAFLK RHYLRLLDLA TARNRATLAV
AVALLLGSLG LFPLLGKSFM PTMKEGALTP QINRVPSISL DESIRMEMAA MKAVAEVPGV
LSVVSKLGRG ESPADPAGPN ESDPIVLLDP ESDRTQDEID EDIRQRLSSI PGVQIVLSQP
ISERVDEMVT GVRSQLAIKV FGDELDDLRD VSEQVARILK SVPGSTDIRV ERLSGQQALT
VDIDRKAIAR HGLNVTDVQG VIESAIGGKD VTTVYEGERR YNVVVRFPEP FRGSPQAVGA
TLLTTSTGAQ VPLNSVARIE LVDGPAQISR EGGKRRVVVG ANVEGRDLGG FVTEVQQRID
KEVQLPDGYY FKYGGQFENM ERAMGTLQVI VPLTIVAIFF LLFVLFNSVK LAGLIILVLP
FASIGGLIGL FVTGEYVSVP ASVGFIALWG IAVLNGVVLV TCIRKLREDG MDVAEAVREG
CVQRFRPVMM TATVALLGLV PFLFATGPGS EVQRPLAIVV IGGLISSTLL TLVVLPTLYR
WFDEKPLEA
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