Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4752 |
Symbol | |
ID | 5750344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5208963 |
End bp | 5211362 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641299857 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001565766 |
Protein GI | 160900184 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0186383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.142458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCCT TGCCCCGTCA ACATCTGCTG AGCCTGGCCC TTGCCACGGC CTTTGGTTCC GTCTCGTTCT GGAGCACCGG GGCGGTGGCC CAGGCCACAG GGCAGGAGGC TGCCCAGGTG TTCGATATCC ATGTGCCGGC CCAGGCCCTG GCTTCGGCCA TCAACGAGCT GTCCCGCCAG ACGGGAACCC AGATGTTTGC CGCAGGCGAA CTGGTGGCCG GGCTCAGTTC CCGCGCCGTC AACGGCCGCC TGACATCGGA GCAGGCCTTG CGGGAGCTGC TGGCCGGCAC GTCCCTGGAA GCCACCAGGA CGCACAACGG AGGCTTCGCC ATCCGCCGTC CCGCAGCCTC CGGCGCGACC TTGCCGACCA TCAACGTCAC GGACAGCGAA ACCGCAGCCG GCCCCGTGCA GGGCTATGTC GCCCGGCGCA GCTCAACGGG CACGAAGACC GATACGCCCA TCCTGGAGAC ACCGCAGTCC ATCACGGTCA TCGGTGCCCA GGAGATCGAG ACGCTGAAGT CGCAAAGCCT GCAGGATGCG CTGGGCTACG CCGCCGGCGT CACCCGCGCC GAGGGCCTGG ACCGGACCTC GGACAGCCTG TACCTGCGCG GATTCCGCAC CACGGGCATG TACCGGGACG GCAGCCTGTT CACGGCCAAC ATCTACGACG GACGGCAGGA GCCCTACGGC CTGGAGCGCA TCGAGCTGCT CAAGGGCGCC TCTTCGGTGA TCTTTGGCTC GGTCTCCCCG GGCGGCGTGG TCAACACCGT GAGCAAGCGG CCCACCACGG AAAAAATCCG GGAATTGAAC ATCGACGCCG GAAGCTTCGG GCGCAGGCAG GTCTCGGGTG ATTTTGCGGG CGCCCTGGAC GACGAGGGCA AATGGTCCTA CCGGCTGGTG GCGCTCAAGC GCGACAGCGA CAGCTTCATC GACCATGTGC CCGATGACAG AACCTATATC GCCCCGTCGC TCAAATGGCA GCCCGATGCG AACACCTCGC TGACACTGTT GGCCGAGGTC CAGAAGGACC GCACCGCCTA CGTCTACGGA CTGCCCGCCT ACGGCACCCT GCTGCCCAAC ATCAATGGAC AGATTCCCCG CAACCGCTTC ATCGGAGAGG CGGGACGGGA CAAATTCGAT CTGGACCGCT ACTCCATCGG CTATCTCTTC GAACATGCCT TTTCCGAGAA GCTCAAGCTC AGGAACAGCA TGCGCTACTA CAACGCAAAG AGCAGCTACT TCAGCACGGA CGGCTGGGGC CTGTCCGCCG ACCAGCGCTC GGTGGTGGAG CGCTACTTCC AGCCGCGCTG GGACCGCTCG TCGGCCTTCG TGACCGATAC CTCGCTGCAG TACCAGCTGG ACCAGGGCCG CGTCAAGCAC ACCATGCTGG TGGGCTTCGA CTACGCCCTG CCAAAGCACG AGACCGAGCG CTATGAACAG CAGGCCGCCG ACCTCGATGT CTTCAACCCG GTCTACGGCA AGCCGGTGGG GCCTGTCTCC CCCTACTACC GCTCGTCCTG GAAGAACGAC TACAAGCGCC TCGGCATCTA TGCGCAGGAC CAGATCAAGA TCGATGACAA GTGGGTGGTT CTGCTGGGCG GCCGCTATGA CAAGGTCCGC TTCAACGAGA CGAACTTCTT CACCGGGGAC GTGAGCGCGG CCAATGAGAA AAGCTCGGCC TTCACGGGCC GGCTGGGCGT GGTCTATCTC GCCGCCAATG GCCTTGCCCC CTTCTTCAGC TACAGCGAAT CCTTCGAGCC CACCCAGGGC CAGGACCGCC TTGGATCACG GTTCAAGCCG ACGACGGGGC AGCAGTACGA GGCTGGTGTC CGCTACCAGC CCAGCGGCTC CCGGGCCATG GTTTCGGCGG CGGTCTTCCA GCTCACCCGC CAGAACCTGC TCGTGCCCGA CCCCCAGGAC GCCAGCAGGG CGTTCAACAT ACAGGCCGGG GAAGTCCGTT CCCGCGGCTT CGAACTGGAG GCACGAAGCT CCATCGGCCG CAATGTGAAC ATCATTGCCG CCTATGCCTA CACGGATGCG CGCACCACGC AGGCAAGCCC CCTGCAGCCG GACGAACTGG GCAAGCGCTC CATCGGCGTG CCCTACAACC AGATATCGCT GTGGGGCGAC TACAGCTTTG GAGACTTCGG GCTTGCCGGC CTCAAGGTGG GCATGGGCGC CAGGTACCTG GGCCAGACAC GCGGCCTGGC CTATGGCGTT CCCGTCTCGC TGCCGGCGTT CACCCTGGTG GATGCCATGG TCAGCTACAC CACCGGACCC TGGCGCTTCG CCCTGAACCT CACCAACCTG ACCGACAAGA CCTATATCGC CAGCTGTTCC TACGGCTGCT TCTACGGCGA GCCCCGCAAG GTGATCGGCA CGGCCACCTA TCGCTGGTAA
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Protein sequence | MRSLPRQHLL SLALATAFGS VSFWSTGAVA QATGQEAAQV FDIHVPAQAL ASAINELSRQ TGTQMFAAGE LVAGLSSRAV NGRLTSEQAL RELLAGTSLE ATRTHNGGFA IRRPAASGAT LPTINVTDSE TAAGPVQGYV ARRSSTGTKT DTPILETPQS ITVIGAQEIE TLKSQSLQDA LGYAAGVTRA EGLDRTSDSL YLRGFRTTGM YRDGSLFTAN IYDGRQEPYG LERIELLKGA SSVIFGSVSP GGVVNTVSKR PTTEKIRELN IDAGSFGRRQ VSGDFAGALD DEGKWSYRLV ALKRDSDSFI DHVPDDRTYI APSLKWQPDA NTSLTLLAEV QKDRTAYVYG LPAYGTLLPN INGQIPRNRF IGEAGRDKFD LDRYSIGYLF EHAFSEKLKL RNSMRYYNAK SSYFSTDGWG LSADQRSVVE RYFQPRWDRS SAFVTDTSLQ YQLDQGRVKH TMLVGFDYAL PKHETERYEQ QAADLDVFNP VYGKPVGPVS PYYRSSWKND YKRLGIYAQD QIKIDDKWVV LLGGRYDKVR FNETNFFTGD VSAANEKSSA FTGRLGVVYL AANGLAPFFS YSESFEPTQG QDRLGSRFKP TTGQQYEAGV RYQPSGSRAM VSAAVFQLTR QNLLVPDPQD ASRAFNIQAG EVRSRGFELE ARSSIGRNVN IIAAYAYTDA RTTQASPLQP DELGKRSIGV PYNQISLWGD YSFGDFGLAG LKVGMGARYL GQTRGLAYGV PVSLPAFTLV DAMVSYTTGP WRFALNLTNL TDKTYIASCS YGCFYGEPRK VIGTATYRW
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