Gene Daci_4735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4735 
Symbol 
ID5750327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5189351 
End bp5190220 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content65% 
IMG OID641299840 
Producthypothetical protein 
Protein accessionYP_001565749 
Protein GI160900167 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.691032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCT CTTCCCCCCT GACCGATACC GATCTGGCCA ACGGCTGGTC GGCCCTTCAC 
AACCAGGCGC ACAACGGCAT GGCATTGCAG CAGAATTCCA ATCGCCTGGC CTTCGCGGAC
CCGGAATTCA TGTTCCGCCG CGAGACCCGC GGCATCCGCA TGCAGCTGGA GCTGCTCAAG
CCCGACCTGG CGCAGATCGA ACGCGGCATA GAGCACACCG TCGTGGTCTA TGGCAGCGCG
CGCTTCGTGG ACCTGGAGCA GGCCGAGCAG CAACTGGCCG ACGCGCAGGC CAGCGGCGAT
GCACAGCGCA TTGCAGTGGC CGAGCGCGCC GTGCGCAACG CCCACCGCTA CGAGCAGGCC
CGCGCCTTCA CGCGCATCGT GGCCGCCGAC AGCCTGAACC AGCCGCCCGA GGAGCGCCTC
TATATCTGCA CCGGCGGCGG CCCCGGCATC ATGGAGGCGG CCAACCGTGG CGCCCATGAT
GTGGGCGCAC CCAGCATCGG CCTGAACATC GAGCTGCCGC ACGAGCAAAA CGGCAACCGC
TTCATCTCGC CGGACCTGAG CTTCAAGTTC CACTACTTCG CCTTGCGCAA GATGCATTTC
ATGATGCGCG CCAAGGCCCT GGTGGCCTTC CCCGGCGGCT TCGGCACGCT GGACGAGCTG
TTCGAGGTGC TGACCCTGAT GCAGACCGGC AAGACGCATT CCGTGCCCGT GATCCTGTTC
GGCACCGAGT TCTGGAAGCG GCTGCTCAAC ATCGACCTGA TGATCGAGGA AGGCACGATC
TCGCCCAAGG ACCTGCAGCT GTTCCGCTAT ACCGATGATC CGGTGGAGGC CTGGGCGCTG
ATCAAGCAGT TCCACGCTGG CGGCTGGTAA
 
Protein sequence
MQISSPLTDT DLANGWSALH NQAHNGMALQ QNSNRLAFAD PEFMFRRETR GIRMQLELLK 
PDLAQIERGI EHTVVVYGSA RFVDLEQAEQ QLADAQASGD AQRIAVAERA VRNAHRYEQA
RAFTRIVAAD SLNQPPEERL YICTGGGPGI MEAANRGAHD VGAPSIGLNI ELPHEQNGNR
FISPDLSFKF HYFALRKMHF MMRAKALVAF PGGFGTLDEL FEVLTLMQTG KTHSVPVILF
GTEFWKRLLN IDLMIEEGTI SPKDLQLFRY TDDPVEAWAL IKQFHAGGW