| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4708 |
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| Symbol | |
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| ID | 5750299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5157818 |
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| End bp | 5158846 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641299812 |
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| Product | integrase family protein |
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| Protein accession | YP_001565722 |
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| Protein GI | 160900140 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.014031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC GCCGCAGCGA CCTGCCCAAG CGTGTCTATG AAAAGGGCGG CGCCTATTGG
CATGTCCGCG CCGAAGGGAA AAAGCGGATC TGGGCGCGCC TGTCCACCAT CCGTGACGGC
CTGCCTGCTC TGTACCGCGC CCTAGCAGCA ATGGAGCAGG CTGATCAGAC CCGGGACAGC
ATGGCCGCGC TGATCGCGGA CTGGCTTGCG GAGGTCGGCA GCAGGCACAG CGTGAAAACG
CAGGCCAACG ACGCCTACCA AACGCGCACG ATCTCCGAAT CGTTCCAGGA GTTTCGCGCG
CAGGAGGTCA CCGCGCCGGC CATTGTGGAG TTCCTGAAAC ACTTCAGCGA CAAGCCGCGA
ACCTACAACG CCTACCGCTC CATGCTGCGA GAGCTGATGC GGTTCGCCGA AGAGAAAGGC
TATCGGCCGC CCGGCACGAA CCCAGTGGAC AGCCTCAAGA CCATGTCCGT GAAGGCGCGC
ACGCGGTACA TCACGGATTC CGAAGTGCGC CGCATCAAGG TGGCCGTGAT GTACGGGGAC
GACGGCAAGC GCACGCGCTC CGGCCACACG ATCTGCGCGC TGATCGATAT GGCCTACCTG
ACCGGGCAGC GCATTGGCGA CCTGCTGACC CTGCGGTGGA GCGATGTGGG CAAGCAGGGC
ATCACGTTCC AGCCGGCAAA AACCGAGGGC TCGACCGGCG CCCAGGTCCT GATCGCATGG
ACACAGCGCC TGCGCAATGT GGTGGACCGC CTGCGGGCGC TACCCAACCA GAGCCCCGAT
TTCGTGTTCT GCACGCTGCA GGGCCAGCCT TACACCTACT CGGGCGCATC CACCGCCTGG
AAGCGGGCAG TGAAGCGGGC CGGCGTGAAG GATTGCCATT TCCACGACCT CCGCGGCAAG
GCCCTGACCG ATGTGGACCG TGGGCGCGGG ATCATGGAGG CGCAGCGCAT GGGCGCCCAC
TCCACCCAGT CCCAGACCGC CGACTATGTG CGCCACAAAC GCGCGCTGAA GGTGGACGCG
ACACGCTGA
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| Protein sequence | MSKRRSDLPK RVYEKGGAYW HVRAEGKKRI WARLSTIRDG LPALYRALAA MEQADQTRDS
MAALIADWLA EVGSRHSVKT QANDAYQTRT ISESFQEFRA QEVTAPAIVE FLKHFSDKPR
TYNAYRSMLR ELMRFAEEKG YRPPGTNPVD SLKTMSVKAR TRYITDSEVR RIKVAVMYGD
DGKRTRSGHT ICALIDMAYL TGQRIGDLLT LRWSDVGKQG ITFQPAKTEG STGAQVLIAW
TQRLRNVVDR LRALPNQSPD FVFCTLQGQP YTYSGASTAW KRAVKRAGVK DCHFHDLRGK
ALTDVDRGRG IMEAQRMGAH STQSQTADYV RHKRALKVDA TR
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