| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4593 |
|---|
| Symbol | |
|---|
| ID | 5750181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5052920 |
|---|
| End bp | 5053558 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641299694 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_001565607 |
|---|
| Protein GI | 160900025 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.703908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTC TGCACATCGA CTCTTCCATC ACCGGCGCCG CTTCGGTGTC CCGCCAGCTG
ACCGCCCAGA CCGTGGCTGC CCTGGTGGCC GCCAACCCCG GCGCCAAGGT CGAATACCTG
GATCTGGCCG TGAACGCCCC CGACCATCTG AACGCGGTGT CCATGGGCTT TCGCACCGGC
CAGGCCGCCA CGACGGAAGC CGAGCGCGCA CAGAACGCCA TCTCCGAAGC CCTGGTGAGC
CAGTTCCTGG CGGCCGATGT GGTCGTGGTT GGCGCTCCGT TCTACAACTT CACCATCTCC
AGCCAGCTCA AGGCCTGGAT CGACCGCATC GCCCAGGGCG GCCGCACCTT CCGCTACACC
GCAGCCGGCC CCGAAGGCCT GGCCAAGGGC AAGAAGGTCA TCGTGGCCTC TACGCGCGGC
GGTGTGTACT CCACCAGCGA AATGGGCCAG GCCCTGGAGC ACCAGGAAAG CTATCTGAAG
ACGGTGTTCG GCTTCCTGGG CATCACCGAT GTGAGCATCG TGCGCGCAGA AGGCGTGGCC
ATGGGCGATG AGTCCAAGGC CAAGGCCCTG GAATCGGCCC GCAGCGACAT CGTGCGTGCA
GCGGCTGCCG CCAATCAGGA AGCGGCCATC GCCGCCTGA
|
|---|
| Protein sequence | MQVLHIDSSI TGAASVSRQL TAQTVAALVA ANPGAKVEYL DLAVNAPDHL NAVSMGFRTG
QAATTEAERA QNAISEALVS QFLAADVVVV GAPFYNFTIS SQLKAWIDRI AQGGRTFRYT
AAGPEGLAKG KKVIVASTRG GVYSTSEMGQ ALEHQESYLK TVFGFLGITD VSIVRAEGVA
MGDESKAKAL ESARSDIVRA AAAANQEAAI AA
|
|---|
| |