Gene Daci_4584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4584 
Symbol 
ID5750172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5043561 
End bp5044034 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID641299685 
ProductRpiB/LacA/LacB family sugar-phosphate isomerase 
Protein accessionYP_001565598 
Protein GI160900016 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.782125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG CCATCGGCTG CGACGAAGCC GCCTGCGACC TCAAGAACGC CGTGAAGCAG 
CATCTGCTGG CCCAGGGCCA CGAAGTGGCC GACTTCGGCA CGCACGACGG CGAGCCGGTG
CTCTACCCCG ACATCGGCAT CGCGGTGGCG CAGGCCATCG TCCAGGGCCG CCATGAGCGC
GGCGTTCTCC TGTGCGGCAC GGGCATAGGC ATGGCCATTG CCGCCAACAA GGTGGCGGGC
ATCCGCGCCG CGCAGGCCCA TGACACCTAT TCGGCCGAGC GCGCCAGCCG CAGCAACGAC
GCGCAGATCA TCACGCTGGG CTCGCGCGTG ATCGGGGTGG AGCTGGCCAA GGCCATCGTG
GACCGCTTCC TCGCATCGCG CTTCGATGGC GGCAGCTCGG CCCTGAAGGT GGATGCCATC
ACCGGCTTTG AACGCTCGCA GGCCGCCGCG GCCGGGCGCG GGCAGGGCGC GTGA
 
Protein sequence
MKLAIGCDEA ACDLKNAVKQ HLLAQGHEVA DFGTHDGEPV LYPDIGIAVA QAIVQGRHER 
GVLLCGTGIG MAIAANKVAG IRAAQAHDTY SAERASRSND AQIITLGSRV IGVELAKAIV
DRFLASRFDG GSSALKVDAI TGFERSQAAA AGRGQGA