Gene Daci_4569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4569 
Symbol 
ID5750157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5026881 
End bp5028014 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content71% 
IMG OID641299670 
ProductABC-2 type transporter 
Protein accessionYP_001565583 
Protein GI160900001 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGG GCTTTGCGCA TGACTTCATC AGCGCCCTGC GTGCCGTGTT CGGCGACGTG 
GGCGTGCTCA TGCTGCTGGT GGGCGCGCCC GTGCTCTACG GCTTCTTCTA TCCCTGGTTC
TATGGGCAGG AGGTCGTGCA GCGCGTGCCC GTGGCCGTGG TGCAGCACGA CGGCAGCGGC
CTGGCACGCC AGATGCTGCG CTTTGCCCAG GCCAGCCCGC GCATCGAGGT GGCCCTGGTC
ACGGGCGACG AGGCCCAGGC GCAGCAGGCC CTGCTGGATG GCCGCGTCAT GGGCTACGCG
CTGCTGCCGC GCGACCTCAA GCGCCGCGTG GTGCGCAGCG AAGAGGCCGT GGTCCCCGTC
TATGCCAACG GTGCCTACCC GCTGGCCGCC AAGCAGGTGC AGTACGGCTT TGCCGAGGCC
TTCGGCACGG TCTCGGCAGG CGTGGAGCTG CGGCGGCTGA CGGCCGGCGG ACAGAGCGCA
CTGCAGGCCC AGGCCAGCCG CTCGCCCGTC AACCTGCAGA TGCAGGCTTT GTTCAATCCG
ACGGAAGGCT ACGGCAGCTT CGTCGTCGCC GCCGTGGCCA TCATCATCCT GCAGCAGACA
CTGCTCATGG GCGGCGCGCT GCTGGTGGGA ACCTGGCGCG AGCAGGGATT GGACAGGGCG
CCGGCACGCA CCTGGCTGGC GCGGCTGCTG GCGCTGTGCA CGCTGGGCTG GCTCTCGGGC
CTGTACTACT TCGGCTGGAT CTTCGTCTGG CACGACTATC CGCGCGGCGG CAATCCCTGG
GGTGCGCTGG CGCTGCTGGC CGTCTTCGTC CCGGCCGTGG CGGGAGCGGC GGCGCTGCTG
GGCTGGTGGC TGGCCAACCG CGAGCGCGCC ATGCAGGTGG TGCTGTTCAC CTCCATCCCG
CTGGCCTTCG TCGGCGGCTT CAGCTGGCCG GCCGAGGCCC TGCCGCAACT GCTGCAGGCG
CTGCGCTGGC TGTCGCCCAG CACGGCGGCC ATCCAGGCCT CGCTGCGCCT GAACCAGGCC
GGCGCCCCGC TGGAGGCGGC GCTATGGCAT CTGTCCGTGC TGCTGGCCCT GGCGCTGCTG
GGCTGGGTGG CCGTGCTCTG GCTGGGAAGC CGCCGCGTGG ACCCTGGCGA TTGA
 
Protein sequence
MARGFAHDFI SALRAVFGDV GVLMLLVGAP VLYGFFYPWF YGQEVVQRVP VAVVQHDGSG 
LARQMLRFAQ ASPRIEVALV TGDEAQAQQA LLDGRVMGYA LLPRDLKRRV VRSEEAVVPV
YANGAYPLAA KQVQYGFAEA FGTVSAGVEL RRLTAGGQSA LQAQASRSPV NLQMQALFNP
TEGYGSFVVA AVAIIILQQT LLMGGALLVG TWREQGLDRA PARTWLARLL ALCTLGWLSG
LYYFGWIFVW HDYPRGGNPW GALALLAVFV PAVAGAAALL GWWLANRERA MQVVLFTSIP
LAFVGGFSWP AEALPQLLQA LRWLSPSTAA IQASLRLNQA GAPLEAALWH LSVLLALALL
GWVAVLWLGS RRVDPGD